Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10946 | Canola | cytosol | 84.62 | 86.34 |
| Bra019295.1-P | Field mustard | cytosol | 82.91 | 84.84 |
| CDX94203 | Canola | cytosol | 82.34 | 84.01 |
| Bra013710.1-P | Field mustard | cytosol | 74.64 | 81.37 |
| CDY44117 | Canola | cytosol | 81.48 | 80.11 |
| CDY10894 | Canola | cytosol | 79.49 | 78.59 |
| CDY28656 | Canola | cytosol | 15.1 | 75.71 |
| CDY43481 | Canola | cytosol | 15.1 | 75.71 |
| CDY10892 | Canola | endoplasmic reticulum, golgi | 40.17 | 74.6 |
| AT4G11260.1 | Thale cress | cytosol | 74.36 | 72.91 |
| Os01t0624500-01 | Rice | cytosol, nucleus | 23.93 | 71.19 |
| CDY44118 | Canola | endoplasmic reticulum, plastid, vacuole | 42.45 | 67.73 |
| KRH38332 | Soybean | cytosol, nucleus | 65.81 | 64.35 |
| KRH08815 | Soybean | nucleus | 64.96 | 63.51 |
| Solyc03g007670.2.1 | Tomato | cytosol, extracellular | 66.38 | 62.97 |
| PGSC0003DMT400053839 | Potato | cytosol, mitochondrion | 65.81 | 62.43 |
| VIT_16s0050g01510.t01 | Wine grape | cytosol | 63.25 | 61.5 |
| KRH77588 | Soybean | cytosol | 62.68 | 60.94 |
| KRH35228 | Soybean | cytosol | 61.54 | 60.5 |
| Zm00001d044172_P002 | Maize | extracellular | 62.11 | 60.39 |
| PGSC0003DMT400074364 | Potato | cytosol | 63.82 | 60.38 |
| Zm00001d011401_P001 | Maize | extracellular | 61.54 | 59.83 |
| EES01101 | Sorghum | cytosol | 61.82 | 59.62 |
| KRH27885 | Soybean | cytosol | 63.25 | 59.36 |
| HORVU3Hr1G055920.7 | Barley | cytosol | 62.96 | 59.25 |
| Solyc06g036410.1.1 | Tomato | cytosol | 11.11 | 59.09 |
| GSMUA_Achr7P10850_001 | Banana | cytosol | 60.97 | 58.31 |
| Solyc06g036420.1.1 | Tomato | cytosol | 48.15 | 57.09 |
| GSMUA_Achr7P14290_001 | Banana | cytosol | 60.11 | 57.03 |
| Bra019498.1-P | Field mustard | cytosol, plastid | 35.61 | 56.56 |
| GSMUA_Achr4P15560_001 | Banana | cytosol | 58.69 | 55.83 |
| TraesCS3B01G255300.1 | Wheat | cytosol | 57.83 | 53.85 |
| KRG94038 | Soybean | cytosol, mitochondrion, nucleus | 10.83 | 52.05 |
| TraesCS3D01G227500.3 | Wheat | golgi | 62.68 | 52.01 |
| VIT_02s0025g00450.t01 | Wine grape | cytosol | 46.15 | 47.93 |
| CDY71639 | Canola | cytosol, plastid | 14.81 | 43.7 |
| VIT_12s0035g01560.t01 | Wine grape | cytosol, plasma membrane, vacuole | 21.08 | 29.25 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:19.1.6.3 | Gene3D:2.60.40.790 | EntrezGene:828457 | ProteinID:AEE84778.1 | ArrayExpress:AT4G23570 |
| EnsemblPlantsGene:AT4G23570 | RefSeq:AT4G23570 | TAIR:AT4G23570 | RefSeq:AT4G23570-TAIR-G | EnsemblPlants:AT4G23570.3 | TAIR:AT4G23570.3 |
| Unigene:At.27360 | InterPro:CS_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:HSP20-like_chaperone |
| InterPro:IPR007052 | InterPro:IPR007699 | InterPro:IPR008978 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| RefSeq:NP_001031704.1 | PFAM:PF04969 | PFAM:PF05002 | PFAM:PF13181 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50005 | PFscan:PS50293 |
| PFscan:PS51048 | PFscan:PS51203 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF496 | InterPro:SGS_dom | Symbol:SGT1A |
| SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF49764 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI00005DC09D | SEG:seg | : | : | : | : |
Description
SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
Coordinates
chr4:+:12299878..12302719
Molecular Weight (calculated)
39297.6 Da
IEP (calculated)
4.648
GRAVY (calculated)
-0.462
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTAEAVADA NKAIELDPSL TKAYLRKGTA CMKLEEYRTA KTALEKGASI
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.