Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000741.1-P | Field mustard | cytosol | 91.06 | 91.06 |
| Bra035239.1-P | Field mustard | cytosol | 89.39 | 90.14 |
| CDX86798 | Canola | cytosol | 89.39 | 89.64 |
| CDY05137 | Canola | cytosol | 89.66 | 89.42 |
| CDY13243 | Canola | cytosol | 86.59 | 87.08 |
| CDX90794 | Canola | cytosol | 85.2 | 84.96 |
| AT4G23570.3 | Thale cress | cytosol | 72.91 | 74.36 |
| Os01t0624500-01 | Rice | cytosol, nucleus | 23.74 | 72.03 |
| Solyc03g007670.2.1 | Tomato | cytosol, extracellular | 65.92 | 63.78 |
| PGSC0003DMT400053839 | Potato | cytosol, mitochondrion | 65.64 | 63.51 |
| KRH38332 | Soybean | cytosol, nucleus | 63.69 | 63.51 |
| KRH08815 | Soybean | nucleus | 63.13 | 62.95 |
| VIT_16s0050g01510.t01 | Wine grape | cytosol | 62.85 | 62.33 |
| Solyc06g036410.1.1 | Tomato | cytosol | 11.45 | 62.12 |
| CDY63435 | Canola | cytosol, mitochondrion, nucleus | 50.0 | 60.88 |
| KRH77588 | Soybean | cytosol | 61.17 | 60.66 |
| PGSC0003DMT400074364 | Potato | cytosol | 62.57 | 60.38 |
| Zm00001d044172_P002 | Maize | extracellular | 60.61 | 60.11 |
| GSMUA_Achr7P10850_001 | Banana | cytosol | 61.45 | 59.95 |
| KRH35228 | Soybean | cytosol | 59.78 | 59.94 |
| EES01101 | Sorghum | cytosol | 60.06 | 59.07 |
| Solyc06g036420.1.1 | Tomato | cytosol | 48.6 | 58.78 |
| Zm00001d011401_P001 | Maize | extracellular | 58.94 | 58.45 |
| KRH27885 | Soybean | cytosol | 60.61 | 58.02 |
| GSMUA_Achr7P14290_001 | Banana | cytosol | 59.22 | 57.3 |
| HORVU3Hr1G055920.7 | Barley | cytosol | 59.5 | 57.1 |
| GSMUA_Achr4P15560_001 | Banana | cytosol | 57.26 | 55.56 |
| TraesCS3B01G255300.1 | Wheat | cytosol | 55.31 | 52.52 |
| TraesCS3D01G227500.3 | Wheat | golgi | 59.22 | 50.12 |
| VIT_02s0025g00450.t01 | Wine grape | cytosol | 44.41 | 47.04 |
| KRG94038 | Soybean | cytosol, mitochondrion, nucleus | 9.5 | 46.58 |
| VIT_12s0035g01560.t01 | Wine grape | cytosol, plasma membrane, vacuole | 20.11 | 28.46 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:19.1.6.3 | Gene3D:2.60.40.790 | EntrezGene:826728 | UniProt:A0A178UX37 | ProteinID:AEE82990.1 |
| EMBL:AF370229 | EMBL:AF428340 | EMBL:AF439976 | EMBL:AJ318019 | ArrayExpress:AT4G11260 | EnsemblPlantsGene:AT4G11260 |
| RefSeq:AT4G11260 | TAIR:AT4G11260 | RefSeq:AT4G11260-TAIR-G | EnsemblPlants:AT4G11260.1 | TAIR:AT4G11260.1 | Symbol:ATSGT1B |
| EMBL:AY085464 | EMBL:AY150487 | Unigene:At.23379 | ProteinID:CAB51410.1 | ProteinID:CAB81227.1 | InterPro:CS_dom |
| GO:GO:0002376 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006511 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009408 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009719 |
| GO:GO:0009734 | GO:GO:0009791 | GO:GO:0009867 | GO:GO:0009987 | GO:GO:0010187 | GO:GO:0019005 |
| GO:GO:0019538 | GO:GO:0030163 | GO:GO:0045087 | GO:GO:0050832 | GO:GO:2000072 | InterPro:HSP20-like_chaperone |
| InterPro:IPR007052 | InterPro:IPR007699 | InterPro:IPR008978 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| RefSeq:NP_192865.1 | ProteinID:OAO98489.1 | PFAM:PF04969 | PFAM:PF05002 | PFAM:PF13181 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50005 | PFscan:PS50293 | PFscan:PS51048 | PFscan:PS51203 | PANTHER:PTHR22904 |
| PANTHER:PTHR22904:SF496 | UniProt:Q9SUT5 | InterPro:SGS_dom | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF49764 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00000AC294 | SEG:seg | : |
Description
SGT1BSGT1B [Source:UniProtKB/TrEMBL;Acc:A0A178UX37]
Coordinates
chr4:-:6851184..6853912
Molecular Weight (calculated)
39764.3 Da
IEP (calculated)
4.747
GRAVY (calculated)
-0.461
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKELAEKAK EAFLDDDFDV AVDLYSKAID LDPNCAAFFA DRAQANIKID NFTEAVVDAN KAIELEPTLA KAYLRKGTAC MKLEEYSTAK AALEKGASVA
101: PNEPKFKKMI DECDLRIAEE EKDLVQPMPP SLPSSSTTPL ATEADAPPVP IPAAPAKPMF RHEFYQKPEE AVVTIFAKKV PKENVTVEFG EQILSVVIDV
201: AGEEAYHLQP RLFGKIIPEK CRFEVLSTKV EIRLAKAEII TWASLEYGKG QSVLPKPNVS SALSQRPVYP SSKPAKDWDK LEAEVKKQEK DEKLDGDAAM
301: NKFFSDIYSS ADEDMRRAMN KSFAESNGTV LSTNWKEVGT KKVESTPPDG MELKKWEY
101: PNEPKFKKMI DECDLRIAEE EKDLVQPMPP SLPSSSTTPL ATEADAPPVP IPAAPAKPMF RHEFYQKPEE AVVTIFAKKV PKENVTVEFG EQILSVVIDV
201: AGEEAYHLQP RLFGKIIPEK CRFEVLSTKV EIRLAKAEII TWASLEYGKG QSVLPKPNVS SALSQRPVYP SSKPAKDWDK LEAEVKKQEK DEKLDGDAAM
301: NKFFSDIYSS ADEDMRRAMN KSFAESNGTV LSTNWKEVGT KKVESTPPDG MELKKWEY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.