Factsheet for Solyc06g036420.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g092780.1.1
Solyc03g007890.2.1
Solyc11g072290.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11260.1	Solyc02g092780.1.1	AT4G37460.1	21798944
AT4G11260.1	Solyc11g072290.1.1	AT5G51700.1	11847307
AT4G11260.1	Solyc11g072290.1.1	AT5G51700.1	18065690
AT4G11260.1	Solyc03g007890.2.1	AT5G52640.1	18065690

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0624500-01	Rice	cytosol, nucleus	29.05	72.88
PGSC0003DMT400074364	Potato	cytosol	90.54	72.24
CDY43481	Canola	cytosol	13.85	58.57
CDY28656	Canola	cytosol	13.85	58.57
CDY10892	Canola	endoplasmic reticulum, golgi	36.15	56.61
Solyc03g007670.2.1	Tomato	cytosol, extracellular	69.93	55.95
VIT_16s0050g01510.t01	Wine grape	cytosol	66.22	54.29
CDY44118	Canola	endoplasmic reticulum, plastid, vacuole	37.84	50.91
Bra019295.1-P	Field mustard	cytosol	58.45	50.44
CDY10946	Canola	cytosol	58.11	50.0
CDX94203	Canola	cytosol	57.09	49.13
Bra013710.1-P	Field mustard	cytosol	53.38	49.07
Zm00001d044172_P002	Maize	extracellular	59.46	48.75
Bra035239.1-P	Field mustard	cytosol	58.45	48.73
AT4G11260.1	Thale cress	cytosol	58.78	48.6
Bra000741.1-P	Field mustard	cytosol	58.78	48.6
CDX86798	Canola	cytosol	58.45	48.46
EES01101	Sorghum	cytosol	59.46	48.35
CDY05137	Canola	cytosol	58.45	48.19
AT4G23570.3	Thale cress	cytosol	57.09	48.15
CDY13243	Canola	cytosol	57.77	48.03
Zm00001d011401_P001	Maize	extracellular	58.45	47.92
CDX90794	Canola	cytosol	57.77	47.63
GSMUA_Achr7P14290_001	Banana	cytosol	59.12	47.3
HORVU3Hr1G055920.7	Barley	cytosol	59.46	47.19
TraesCS3B01G255300.1	Wheat	cytosol	59.8	46.95
GSMUA_Achr4P15560_001	Banana	cytosol	58.45	46.88
Bra019498.1-P	Field mustard	cytosol, plastid	34.8	46.61
GSMUA_Achr7P10850_001	Banana	cytosol	57.43	46.32
CDY10894	Canola	cytosol	55.07	45.92
CDY44117	Canola	cytosol	54.73	45.38
TraesCS3D01G227500.3	Wheat	golgi	59.46	41.61
CDY63435	Canola	cytosol, mitochondrion, nucleus	40.2	40.48
CDY71639	Canola	cytosol, plastid	14.53	36.13
VIT_12s0035g01560.t01	Wine grape	cytosol, plasma membrane, vacuole	22.3	26.09
Solyc06g036410.1.1	Tomato	cytosol	1.69	7.58

Protein Annotations

EnsemblPlants:Solyc06g036420.1.1	EnsemblPlantsGene:Solyc06g036420.1	Gene3D:2.60.40.790	InterPro:CS_dom	InterPro:HSP20-like_chaperone	InterPro:IPR007052
InterPro:IPR007699	InterPro:IPR008978	InterPro:SGS_dom	PANTHER:PTHR22904	PANTHER:PTHR22904:SF496	PFAM:PF04969
PFAM:PF05002	PFscan:PS51048	PFscan:PS51203	SEG:seg	SUPFAM:SSF49764	UniParc:UPI000276612A
UniProt:K4C508	MapMan:19.1.6.3	:	:	:	:

Description

No Description!

Coordinates

chr6:+:25974441..25977666

Molecular Weight (calculated)

33150.4 Da

IEP (calculated)

5.073

GRAVY (calculated)

-0.547

Length

296 amino acids

Sequence
(BLAST)

001: MRKGLACMKL EEYQTAKETL EIGASLAPGE SRFTRLINEC DEHITKEAGE LPKCATVETT ESIVPSFGSM SLDNVAAVPK ETQLAFNLPY EGTPAVQPKH
101: EFYQKPEEAV VTIFAKGIPV ENVSVDFGEQ ILSVSIDIPG EAAYSFQPRL FGKIIPQKCK YEVMSTKIEI RLAKAESIHW KCLEYTGEIA VVQRPNVSSD
201: SHKPSYPSSK MKCKDWDKLE AQVKKEEKEE KLEGDAALNK FFQDIYKDGD DDARRAMMKS FVESNGTVLS TNWNKVGTKK VEGSPPDGME LKQWEH

Best Arabidopsis Sequence Match ( AT4G23570.3 )
(BLAST)

001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTAEAVADA NKAIELDPSL TKAYLRKGTA CMKLEEYRTA KTALEKGASI
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I

Arabidopsis Description

SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.