Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013710.1-P | Field mustard | cytosol | 82.91 | 91.93 |
| CDY10894 | Canola | cytosol | 85.43 | 85.92 |
| CDY10946 | Canola | cytosol | 81.23 | 84.3 |
| CDX94203 | Canola | cytosol | 78.99 | 81.98 |
| AT4G23570.3 | Thale cress | cytosol | 80.11 | 81.48 |
| CDY10892 | Canola | endoplasmic reticulum, golgi | 42.86 | 80.95 |
| CDY43481 | Canola | cytosol | 14.57 | 74.29 |
| CDY28656 | Canola | cytosol | 14.57 | 74.29 |
| CDX90794 | Canola | cytosol | 72.55 | 72.14 |
| CDY05137 | Canola | cytosol | 72.55 | 72.14 |
| CDY13243 | Canola | cytosol | 71.71 | 71.91 |
| CDX86798 | Canola | cytosol | 71.71 | 71.71 |
| CDY44118 | Canola | endoplasmic reticulum, plastid, vacuole | 43.98 | 71.36 |
| Os01t0624500-01 | Rice | cytosol, nucleus | 22.41 | 67.8 |
| KRH08815 | Soybean | nucleus | 61.9 | 61.56 |
| Solyc03g007670.2.1 | Tomato | cytosol, extracellular | 63.59 | 61.35 |
| KRH38332 | Soybean | cytosol, nucleus | 61.62 | 61.28 |
| PGSC0003DMT400053839 | Potato | cytosol, mitochondrion | 63.31 | 61.08 |
| Zm00001d044172_P002 | Maize | extracellular | 61.06 | 60.39 |
| VIT_16s0050g01510.t01 | Wine grape | cytosol | 60.5 | 59.83 |
| Zm00001d011401_P001 | Maize | extracellular | 59.38 | 58.73 |
| GSMUA_Achr7P10850_001 | Banana | cytosol | 60.22 | 58.58 |
| EES01101 | Sorghum | cytosol | 59.66 | 58.52 |
| KRH77588 | Soybean | cytosol | 59.1 | 58.45 |
| HORVU3Hr1G055920.7 | Barley | cytosol | 60.78 | 58.18 |
| KRH35228 | Soybean | cytosol | 57.7 | 57.7 |
| Solyc06g036410.1.1 | Tomato | cytosol | 10.64 | 57.58 |
| PGSC0003DMT400074364 | Potato | cytosol | 59.38 | 57.14 |
| KRH27885 | Soybean | cytosol | 59.38 | 56.68 |
| GSMUA_Achr7P14290_001 | Banana | cytosol | 57.98 | 55.95 |
| GSMUA_Achr4P15560_001 | Banana | cytosol | 57.42 | 55.56 |
| Solyc06g036420.1.1 | Tomato | cytosol | 45.38 | 54.73 |
| TraesCS3B01G255300.1 | Wheat | cytosol | 57.14 | 54.11 |
| TraesCS3D01G227500.3 | Wheat | golgi | 60.78 | 51.3 |
| CDY63435 | Canola | cytosol, mitochondrion, nucleus | 38.94 | 47.28 |
| VIT_02s0025g00450.t01 | Wine grape | cytosol | 43.42 | 45.86 |
| CDY71639 | Canola | cytosol, plastid | 14.85 | 44.54 |
| KRG94038 | Soybean | cytosol, mitochondrion, nucleus | 8.68 | 42.47 |
| VIT_12s0035g01560.t01 | Wine grape | cytosol, plasma membrane, vacuole | 17.93 | 25.3 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:19.1.6.3 | Gene3D:2.60.40.790 | UniProt:A0A078I233 | EnsemblPlants:CDY44117 | ProteinID:CDY44117 |
| ProteinID:CDY44117.1 | InterPro:CS_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00079560001 | InterPro:HSP20-like_chaperone | InterPro:IPR007052 | InterPro:IPR007699 | InterPro:IPR008978 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF04969 | PFAM:PF05002 | PFAM:PF13181 | PFscan:PS50005 |
| PFscan:PS50293 | PFscan:PS51048 | PFscan:PS51203 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF496 | InterPro:SGS_dom |
| SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF49764 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI0004EEE605 | SEG:seg | : | : | : | : |
Description
BnaA01g13250DBnaA01g13250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I233]
Coordinates
chrLK032579:+:180667..182522
Molecular Weight (calculated)
40139.0 Da
IEP (calculated)
4.724
GRAVY (calculated)
-0.368
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKELAAKAK EAFVDDDFDE AVDLYSKAID LDPNCAEFFA DRAQANVKLE NLIAEAVEDA NKAIELDPLL TKAYLRKGTA CMKLEEYQTA KNALEKGASI
101: APSESKFKKL IDECDLRISE EEKILVQPVA SPSVKADLTH QTVLFFTKIQ VEIIVIYLRH DYYQKPEEVV VTIFAKGIPK QNVNIDFGEQ VLSVVIDVPG
201: EEEAYHLQPR LFGKIVPEKC RYEVLSTKVE IRLAKAEIIT WASLEHAKVP AVLPKPNVLS EVSVRPAYPS SKKVKDWDKL EAEVKKQEND EKLEGDAALD
301: KSLREMYSNA DEDMRRAMSK SFVESNGTVL STNWKEVGAK TIESTPPDGM ELKKWEI
101: APSESKFKKL IDECDLRISE EEKILVQPVA SPSVKADLTH QTVLFFTKIQ VEIIVIYLRH DYYQKPEEVV VTIFAKGIPK QNVNIDFGEQ VLSVVIDVPG
201: EEEAYHLQPR LFGKIVPEKC RYEVLSTKVE IRLAKAEIIT WASLEHAKVP AVLPKPNVLS EVSVRPAYPS SKKVKDWDKL EAEVKKQEND EKLEGDAALD
301: KSLREMYSNA DEDMRRAMSK SFVESNGTVL STNWKEVGAK TIESTPPDGM ELKKWEI
001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTAEAVADA NKAIELDPSL TKAYLRKGTA CMKLEEYRTA KTALEKGASI
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I
Arabidopsis Description
SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.