Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43481 | Canola | cytosol | 100.0 | 100.0 |
| Os01t0624500-01 | Rice | cytosol, nucleus | 61.43 | 36.44 |
| CDY10892 | Canola | endoplasmic reticulum, golgi | 70.0 | 25.93 |
| CDY44118 | Canola | endoplasmic reticulum, plastid, vacuole | 70.0 | 22.27 |
| CDY10946 | Canola | cytosol | 78.57 | 15.99 |
| CDX94203 | Canola | cytosol | 77.14 | 15.7 |
| CDY63435 | Canola | cytosol, mitochondrion, nucleus | 64.29 | 15.31 |
| AT4G23570.3 | Thale cress | cytosol | 75.71 | 15.1 |
| CDY10894 | Canola | cytosol | 75.71 | 14.93 |
| CDY44117 | Canola | cytosol | 74.29 | 14.57 |
| Solyc06g036420.1.1 | Tomato | cytosol | 58.57 | 13.85 |
| CDX90794 | Canola | cytosol | 70.0 | 13.65 |
| CDY05137 | Canola | cytosol | 70.0 | 13.65 |
| CDY13243 | Canola | cytosol | 68.57 | 13.48 |
| CDX86798 | Canola | cytosol | 68.57 | 13.45 |
| KRH38332 | Soybean | cytosol, nucleus | 62.86 | 12.26 |
| Zm00001d044172_P002 | Maize | extracellular | 62.86 | 12.19 |
| Solyc03g007670.2.1 | Tomato | cytosol, extracellular | 64.29 | 12.16 |
| EES01101 | Sorghum | cytosol | 62.86 | 12.09 |
| Zm00001d011401_P001 | Maize | extracellular | 61.43 | 11.91 |
| KRH77588 | Soybean | cytosol | 61.43 | 11.91 |
| VIT_16s0050g01510.t01 | Wine grape | cytosol | 61.43 | 11.91 |
| PGSC0003DMT400053839 | Potato | cytosol, mitochondrion | 62.86 | 11.89 |
| GSMUA_Achr7P14290_001 | Banana | cytosol | 62.86 | 11.89 |
| KRH08815 | Soybean | nucleus | 60.0 | 11.7 |
| HORVU3Hr1G055920.7 | Barley | cytosol | 61.43 | 11.53 |
| KRH27885 | Soybean | cytosol | 61.43 | 11.5 |
| TraesCS3B01G255300.1 | Wheat | cytosol | 61.43 | 11.41 |
| KRH35228 | Soybean | cytosol | 55.71 | 10.92 |
| GSMUA_Achr7P10850_001 | Banana | cytosol | 57.14 | 10.9 |
| PGSC0003DMT400074364 | Potato | cytosol | 57.14 | 10.78 |
| GSMUA_Achr4P15560_001 | Banana | cytosol | 54.29 | 10.3 |
| TraesCS3D01G227500.3 | Wheat | golgi | 61.43 | 10.17 |
| VIT_12s0035g01560.t01 | Wine grape | cytosol, plasma membrane, vacuole | 27.14 | 7.51 |
| CDY71639 | Canola | cytosol, plastid | 8.57 | 5.04 |
| VIT_02s0025g00450.t01 | Wine grape | cytosol | 22.86 | 4.73 |
| KRG94038 | Soybean | cytosol, mitochondrion, nucleus | 2.86 | 2.74 |
| Solyc06g036410.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY28656 | EnsemblPlantsGene:GSBRNA2T00040724001 | InterPro:IPR007699 | InterPro:SGS_dom | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF496 |
| PFAM:PF05002 | PFscan:PS51048 | ProteinID:CDY28656 | ProteinID:CDY28656.1 | ProteinID:CDY43481.1 | UniParc:UPI0004EEB702 |
| UniProt:A0A078I0Z0 | MapMan:35.2 | : | : | : | : |
Description
BnaC09g32190DBnaA01g21360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0Z0]
Coordinates
chrLK032224:+:463933..464363
Molecular Weight (calculated)
8026.5 Da
IEP (calculated)
5.104
GRAVY (calculated)
-0.746
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MTHSLHIWNF GAEVSMRLAY PSSKRVKDWD KLEAEVESNG TVFSTDEKEV GTKKIESTPP DGMELKKWEI
001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTAEAVADA NKAIELDPSL TKAYLRKGTA CMKLEEYRTA KTALEKGASI
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I
Arabidopsis Description
SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.