Factsheet for Bra013710.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44117	Canola	cytosol	91.93	82.91
Bra019295.1-P	Field mustard	cytosol	83.54	78.43
AT4G23570.3	Thale cress	cytosol	81.37	74.64
Bra035239.1-P	Field mustard	cytosol	73.29	66.48
Bra000741.1-P	Field mustard	cytosol	73.6	66.2
Os01t0624500-01	Rice	cytosol, nucleus	24.22	66.1
Solyc03g007670.2.1	Tomato	cytosol, extracellular	64.6	56.22
Solyc06g036410.1.1	Tomato	cytosol	11.49	56.06
PGSC0003DMT400053839	Potato	cytosol, mitochondrion	64.29	55.95
KRH08815	Soybean	nucleus	62.11	55.71
KRH38332	Soybean	cytosol, nucleus	61.49	55.15
Bra019498.1-P	Field mustard	cytosol, plastid	37.58	54.75
VIT_16s0050g01510.t01	Wine grape	cytosol	60.87	54.29
Zm00001d044172_P002	Maize	extracellular	60.56	54.02
KRH77588	Soybean	cytosol	60.56	54.02
Solyc06g036420.1.1	Tomato	cytosol	49.07	53.38
Zm00001d011401_P001	Maize	extracellular	59.63	53.19
GSMUA_Achr7P10850_001	Banana	cytosol	60.25	52.86
HORVU3Hr1G055920.7	Barley	cytosol	61.18	52.81
EES01101	Sorghum	cytosol	59.63	52.75
KRH27885	Soybean	cytosol	60.56	52.14
KRH35228	Soybean	cytosol	57.45	51.82
PGSC0003DMT400074364	Potato	cytosol	59.63	51.75
GSMUA_Achr7P14290_001	Banana	cytosol	58.39	50.81
GSMUA_Achr4P15560_001	Banana	cytosol	57.76	50.41
TraesCS3B01G255300.1	Wheat	cytosol	57.14	48.81
TraesCS3D01G227500.3	Wheat	golgi	61.18	46.57
VIT_02s0025g00450.t01	Wine grape	cytosol	43.17	41.12
KRG94038	Soybean	cytosol, mitochondrion, nucleus	9.32	41.1
VIT_12s0035g01560.t01	Wine grape	cytosol, plasma membrane, vacuole	18.63	23.72

Protein Annotations

Gene3D:1.25.40.10	MapMan:19.1.6.3	Gene3D:2.60.40.790	EnsemblPlantsGene:Bra013710	EnsemblPlants:Bra013710.1	EnsemblPlants:Bra013710.1-P
InterPro:CS_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:HSP20-like_chaperone	InterPro:IPR007052
InterPro:IPR007699	InterPro:IPR008978	InterPro:IPR011990	InterPro:IPR019734	UniProt:M4DB50	PFAM:PF04969
PFAM:PF05002	PFscan:PS50005	PFscan:PS51048	PFscan:PS51203	PANTHER:PTHR22904	PANTHER:PTHR22904:SF496
InterPro:SGS_dom	SUPFAM:SSF48452	SUPFAM:SSF49764	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002545CF5
SEG:seg	:	:	:	:	:

Description

AT4G23570 (E=6e-123) SGT1A | SGT1A; protein binding

Coordinates

chrA01:+:7315116..7316722

Molecular Weight (calculated)

35945.9 Da

IEP (calculated)

5.237

GRAVY (calculated)

-0.442

Length

322 amino acids

Sequence
(BLAST)

001: MAKELAAKAK EAFVDDDFDG AVDLYSKAID LDPNCAEFFA DRAQANVKLV LTACMKLEEY QTAKNALQKG ASIAPSESKF KKLIDECDLR ISEEEKILVQ
101: PVASPSVKAD LTHVSSAPAK PKFRHDYYQK PEEVVVTIFA KGIPKQNVNI DFGEQVLSVV IDVPGEEEAY HLQPRLFGKI VPEKCRYEVL STKVEIRLAK
201: AEIITWASLE HAKVPAVLPK PNVLSEVSVR PAYPSSKKVK DWDKLEAEVK KQDNDEKLEG DAALDKSLRE MYSNADEDMR RAMSKSFVES NGTVLSTNWK
301: EVGAKTIKST PPDGMELKKW EI

Best Arabidopsis Sequence Match ( AT4G23570.1 )
(BLAST)

001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTEAVADAN KAIELDPSLT KAYLRKGTAC MKLEEYRTAK TALEKGASIT
101: PSESKFKKLI DECNFLITEE EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID FGEQILSVVI EVPGEDAYYL
201: QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLEGDA ALNKFFREIY
301: QNADEDMRRA MSKSFVESNG TVLSTNWQEV GTKTIESTPP DGMELKKWEI

Arabidopsis Description

SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.