Factsheet for Bra019295.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10946	Canola	cytosol	97.67	97.38
Bra013710.1-P	Field mustard	cytosol	78.43	83.54
AT4G23570.3	Thale cress	cytosol	84.84	82.91
Bra035239.1-P	Field mustard	cytosol	79.59	76.9
Bra000741.1-P	Field mustard	cytosol	79.88	76.54
Os01t0624500-01	Rice	cytosol, nucleus	25.07	72.88
Solyc03g007670.2.1	Tomato	cytosol, extracellular	68.22	63.24
PGSC0003DMT400053839	Potato	cytosol, mitochondrion	67.93	62.97
KRH38332	Soybean	cytosol, nucleus	65.89	62.95
KRH08815	Soybean	nucleus	65.89	62.95
KRH77588	Soybean	cytosol	65.01	61.77
VIT_16s0050g01510.t01	Wine grape	cytosol	64.72	61.5
Bra019498.1-P	Field mustard	cytosol, plastid	39.36	61.09
Zm00001d044172_P002	Maize	extracellular	64.14	60.94
GSMUA_Achr7P10850_001	Banana	cytosol	64.72	60.49
PGSC0003DMT400074364	Potato	cytosol	65.01	60.11
KRH27885	Soybean	cytosol	65.01	59.63
Zm00001d011401_P001	Maize	extracellular	62.68	59.56
EES01101	Sorghum	cytosol	62.97	59.34
Solyc06g036410.1.1	Tomato	cytosol	11.37	59.09
KRH35228	Soybean	cytosol	61.22	58.82
Solyc06g036420.1.1	Tomato	cytosol	50.44	58.45
HORVU3Hr1G055920.7	Barley	cytosol	63.56	58.45
GSMUA_Achr7P14290_001	Banana	cytosol	62.39	57.84
GSMUA_Achr4P15560_001	Banana	cytosol	61.81	57.45
TraesCS3B01G255300.1	Wheat	cytosol	59.48	54.11
TraesCS3D01G227500.3	Wheat	golgi	63.85	51.77
KRG94038	Soybean	cytosol, mitochondrion, nucleus	10.79	50.68
VIT_02s0025g00450.t01	Wine grape	cytosol	45.48	46.15
VIT_12s0035g01560.t01	Wine grape	cytosol, plasma membrane, vacuole	20.41	27.67

Protein Annotations

Gene3D:1.25.40.10	MapMan:19.1.6.3	Gene3D:2.60.40.790	EnsemblPlantsGene:Bra019295	EnsemblPlants:Bra019295.1	EnsemblPlants:Bra019295.1-P
InterPro:CS_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:HSP20-like_chaperone	InterPro:IPR007052
InterPro:IPR007699	InterPro:IPR008978	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:M4DS02
PFAM:PF04969	PFAM:PF05002	PFAM:PF13181	PFAM:PF14559	PFscan:PS50005	PFscan:PS50293
PFscan:PS51048	PFscan:PS51203	PANTHER:PTHR22904	PANTHER:PTHR22904:SF496	InterPro:SGS_dom	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF49764	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002540EF4
SEG:seg	:	:	:	:	:

Description

AT4G23570 (E=1e-161) SGT1A | SGT1A; protein binding

Coordinates

chrA03:+:25133879..25135765

Molecular Weight (calculated)

38659.1 Da

IEP (calculated)

5.177

GRAVY (calculated)

-0.549

Length

343 amino acids

Sequence
(BLAST)

001: MAKELAAQAK EAFVDDDFDV AVDLYSKAID LDPNCADFFA DRAQAYIKLQ NFTEAVADAK KAIELDPSLT KAYLRKGTAC MKLEEYRTAK TALEKGASIA
101: PSESKFKKLI DECDLRITEE EKDLVQSPVK VDQTPVPAEP AKPKFRHEYY QKPEEVVVTV FAKGIQKQNV NIDFGEQILS VVIDVPGEEA YHLQPRLFGK
201: IVPEKCKYEV MSTKIEIRLA KAEIITWASL EHGKGPKVLP KPNVSTEVSV RPAYPSSKKV KDWDKLEAEV KKQEKDEKLE GDAALNKFFR EIYSNADEDM
301: RRAMSKSFVE SNGTVLSTDW KEVGAKKIES TPPDGMELKK WEI

Best Arabidopsis Sequence Match ( AT4G23570.1 )
(BLAST)

001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTEAVADAN KAIELDPSLT KAYLRKGTAC MKLEEYRTAK TALEKGASIT
101: PSESKFKKLI DECNFLITEE EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID FGEQILSVVI EVPGEDAYYL
201: QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLEGDA ALNKFFREIY
301: QNADEDMRRA MSKSFVESNG TVLSTNWQEV GTKTIESTPP DGMELKKWEI

Arabidopsis Description

SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.