Factsheet for Bra019498.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71639	Canola	cytosol, plastid	36.2	67.23
Os01t0624500-01	Rice	cytosol, nucleus	30.77	57.63
KRG94038	Soybean	cytosol, mitochondrion, nucleus	13.12	39.73
Bra019295.1-P	Field mustard	cytosol	61.09	39.36
Bra013710.1-P	Field mustard	cytosol	54.75	37.58
AT4G23570.3	Thale cress	cytosol	56.56	35.61
Solyc06g036420.1.1	Tomato	cytosol	46.61	34.8
Bra035239.1-P	Field mustard	cytosol	54.3	33.8
Bra000741.1-P	Field mustard	cytosol	54.75	33.8
PGSC0003DMT400074364	Potato	cytosol	49.32	29.38
Zm00001d044172_P002	Maize	extracellular	47.96	29.36
Zm00001d011401_P001	Maize	extracellular	47.96	29.36
Solyc03g007670.2.1	Tomato	cytosol, extracellular	48.87	29.19
EES01101	Sorghum	cytosol	47.96	29.12
VIT_16s0050g01510.t01	Wine grape	cytosol	47.51	29.09
KRH77588	Soybean	cytosol	47.51	29.09
PGSC0003DMT400053839	Potato	cytosol, mitochondrion	47.51	28.38
HORVU3Hr1G055920.7	Barley	cytosol	47.06	27.88
KRH27885	Soybean	cytosol	47.06	27.81
KRH38332	Soybean	cytosol, nucleus	44.8	27.58
KRH35228	Soybean	cytosol	43.89	27.17
TraesCS3B01G255300.1	Wheat	cytosol	46.15	27.06
KRH08815	Soybean	nucleus	43.89	27.02
GSMUA_Achr7P10850_001	Banana	cytosol	44.34	26.7
GSMUA_Achr4P15560_001	Banana	cytosol	43.44	26.02
GSMUA_Achr7P14290_001	Banana	cytosol	43.44	25.95
TraesCS3D01G227500.3	Wheat	golgi	47.06	24.59
VIT_12s0035g01560.t01	Wine grape	cytosol, plasma membrane, vacuole	22.62	19.76
VIT_02s0025g00450.t01	Wine grape	cytosol	25.34	16.57
Solyc06g036410.1.1	Tomato	cytosol	2.71	9.09

Protein Annotations

EnsemblPlants:Bra019498.1	EnsemblPlants:Bra019498.1-P	EnsemblPlantsGene:Bra019498	Gene3D:2.60.40.790	InterPro:HSP20-like_chaperone	InterPro:IPR007699
InterPro:IPR008978	InterPro:SGS_dom	PANTHER:PTHR22904	PANTHER:PTHR22904:SF496	PFAM:PF05002	PFscan:PS51048
SUPFAM:SSF49764	UniParc:UPI000253F0E2	UniProt:M4DSK5	MapMan:19.1.6.3	:	:

Description

AT4G23570 (E=4e-050) SGT1A | SGT1A; protein binding

Coordinates

chrA06:+:12869467..12870587

Molecular Weight (calculated)

25324.6 Da

IEP (calculated)

9.293

GRAVY (calculated)

-0.418

Length

221 amino acids

Sequence
(BLAST)

001: MANALVFLSD LHTGRSSFSV QVRLFRFWEA RSVRRGGDHM GVDMLLLDSQ LSVVIDVPGE EAYHLQPRLI LKIIVSPFVY LIHAVPEKCK YEVMSTKIEK
101: RLAKEEIITW ASLKHGKGPT SLDIWNFGAN VSMRLAYPSS MRVKDWDKLE DEVKKHEKNE KPEGDTALNK FFRKIYSNAD EDMRREMSKS FVKVESNGTV
201: FSIDRKEVGT KKIESTPPDG M

Best Arabidopsis Sequence Match ( AT4G23570.3 )
(BLAST)

001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTAEAVADA NKAIELDPSL TKAYLRKGTA CMKLEEYRTA KTALEKGASI
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I

Arabidopsis Description

SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.