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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum
Any Predictor:cytosol, mitochondrion
BaCelLo:secretory
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:cytosol
 endoplasmic reticulum: 27224218
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002461.1-P Field mustard cytosol 85.02 42.75
KRH06058 Soybean mitochondrion 99.25 38.46
CDY08914 Canola cytosol 85.02 36.55
CDY34275 Canola cytosol 85.02 36.32
CDY24832 Canola cytosol 85.02 36.32
CDY11007 Canola cytosol 83.9 36.01
AT4G24280.1 Thale cress plastid 86.14 32.03
Bra010498.1-P Field mustard plastid 85.02 31.66
Bra013786.1-P Field mustard plastid 84.27 31.65
AT5G49910.1 Thale cress plastid 85.02 31.62
Bra019231.1-P Field mustard plastid 83.9 31.55
CDX92631 Canola plastid 83.15 31.36
CDY03462 Canola plastid 83.52 31.32
CDY03461 Canola plastid 71.91 27.0
CDY03459 Canola cytosol 62.55 25.23
KRH70484 Soybean cytosol 46.07 21.96
KRH21710 Soybean endoplasmic reticulum 49.06 19.44
KRH10640 Soybean nucleus 49.06 19.44
KRH49859 Soybean endoplasmic reticulum, nucleus 48.69 19.2
KRH19702 Soybean endoplasmic reticulum 45.32 19.15
KRH42039 Soybean mitochondrion 48.31 19.05
KRH01631 Soybean endoplasmic reticulum 46.07 18.95
KRH24810 Soybean nucleus 45.32 18.64
KRH67530 Soybean endoplasmic reticulum, nucleus 45.32 18.53
KRH29811 Soybean nucleus 44.94 18.49
KRG95806 Soybean nucleus 44.94 18.35
KRH21163 Soybean endoplasmic reticulum 32.58 17.79
KRH03029 Soybean nucleus 42.7 17.67
KRH72327 Soybean endoplasmic reticulum 42.7 17.48
KRH60086 Soybean endoplasmic reticulum 43.45 17.37
KRH41370 Soybean endoplasmic reticulum 42.7 17.09
KRH60091 Soybean nucleus 43.07 16.41
KRH41372 Soybean endoplasmic reticulum 43.07 16.24
KRH49659 Soybean endoplasmic reticulum 34.08 14.38
KRH11084 Soybean endoplasmic reticulum 31.46 13.1
KRH01609 Soybean cytosol 32.58 12.93
KRH01610 Soybean cytosol, endoplasmic reticulum 32.21 12.78
KRH11083 Soybean cytosol, endoplasmic reticulum 28.09 12.76
KRH01651 Soybean cytosol 28.46 12.62
KRH70355 Soybean cytosol 35.21 10.54
KRH26302 Soybean plastid 0.0 0.0
Protein Annotations
Gene3D:1.20.1270.10Gene3D:2.60.34.10MapMan:35.1UniProt:A0A0R0HIJ0EMBL:ACUP02007706EnsemblPlantsGene:GLYMA_12G1662001
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sf
InterPro:Hsp_70_famInterPro:IPR029047InterPro:IPR029048EnsemblPlants:KRH26303ProteinID:KRH26303ProteinID:KRH26303.1
PFAM:PF00012PRINTS:PR00301PANTHER:PTHR19375PANTHER:PTHR19375:SF211SUPFAM:SSF100920SUPFAM:SSF100934
UniParc:UPI0006ED95B4SEG:seg::::
Description
hypothetical protein
Coordinates
chr12:+:32064138..32065513
Molecular Weight (calculated)
27892.7 Da
IEP (calculated)
4.316
GRAVY (calculated)
-0.423
Length
267 amino acids
Sequence
(BLAST)
001: AGVLAGDVSD IVLLDVTPLS LGLETLGGVM TKIIPRNTTL PTSKSEVFST AADGQTSVEI NVLQGEREFV RDNKSLGSFR LDGIPPAPRG VPQIEVKFDI
101: DANGILSVTA IDKGTGKKQD ITITGASTLP SDEVERMVNE AEKFSKEDKE KRDAIDTKNQ ADSVVYQTEK QLKELGDKVP GPVKEKVEAK LGELKDAISG
201: GSTQAIKDAM AALNQEVMQL GQSLYNQPGA AGAGGPTPPP GADSGPSESS GKGPDGDVID ADFTDSK
Best Arabidopsis Sequence Match ( AT4G24280.1 )
(BLAST)
001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ
Arabidopsis Description
HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.