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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 9
  • extracellular 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, nucleus, secretory
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum, nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
 plasma membrane: 19658398
endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
nucleus: 27291164
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 19658398 doi
S Komatsu, T Wada, Y Abaléa, MZ Nouri, Y Nanjo, N Nakayama, S Shimamura, R Yamamoto, T Nakamura, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH60086 Soybean endoplasmic reticulum 98.5 98.35
VIT_02s0025g02140.t01 Wine grape endoplasmic reticulum 94.6 94.6
Solyc08g082820.2.1 Tomato extracellular 92.8 92.94
GSMUA_Achr3P27250_001 Banana endoplasmic reticulum 83.51 92.68
GSMUA_Achr9P23710_001 Banana endoplasmic reticulum 84.56 92.46
PGSC0003DMT400031937 Potato extracellular 92.2 92.2
PGSC0003DMT400047710 Potato endoplasmic reticulum 92.05 91.92
Zm00001d014993_P001 Maize endoplasmic reticulum 91.3 91.86
CDX67525 Canola endoplasmic reticulum 79.31 91.68
KRH60091 Soybean nucleus 96.25 91.58
Os02t0115900-02 Rice plasma membrane 91.3 91.58
Bra028521.1-P Field mustard endoplasmic reticulum 91.3 91.58
Zm00001d054043_P007 Maize endoplasmic reticulum 91.0 91.55
AT5G28540.1 Thale cress endoplasmic reticulum 91.75 91.48
CDY63497 Canola endoplasmic reticulum 88.01 91.43
VIT_16s0098g01580.t01 Wine grape endoplasmic reticulum 91.3 91.3
Solyc03g082920.2.1 Tomato nucleus, plastid 91.3 91.3
CDX77423 Canola cytosol, endoplasmic reticulum 87.86 91.28
TraesCS6D01G049100.1 Wheat golgi 90.85 91.13
TraesCS6B01G058300.1 Wheat endoplasmic reticulum 90.85 91.13
TraesCS6A01G042600.1 Wheat golgi 90.85 91.13
Bra022819.1-P Field mustard endoplasmic reticulum 91.3 91.03
CDY23972 Canola endoplasmic reticulum 87.56 90.97
CDX84809 Canola endoplasmic reticulum 87.56 90.97
Bra015047.1-P Field mustard endoplasmic reticulum 90.7 90.84
CDY46766 Canola endoplasmic reticulum 87.41 90.81
CDX79726 Canola endoplasmic reticulum 87.41 90.81
KRH41372 Soybean endoplasmic reticulum 95.95 90.4
CDY13371 Canola cytosol, endoplasmic reticulum 91.15 90.34
AT5G42020.3 Thale cress endoplasmic reticulum 90.55 89.75
Bra023110.1-P Field mustard endoplasmic reticulum 85.91 89.25
KXG29291 Sorghum plasma membrane 88.31 86.87
GSMUA_Achr4P11940_001 Banana cytosol 92.8 85.73
KRH24810 Soybean nucleus 62.52 64.25
KRH29811 Soybean nucleus 62.52 64.25
KRH01631 Soybean endoplasmic reticulum 62.37 64.1
KRH03029 Soybean nucleus 61.92 64.03
KRG95806 Soybean nucleus 62.07 63.3
KRH19702 Soybean endoplasmic reticulum 59.97 63.29
KRH67530 Soybean endoplasmic reticulum, nucleus 61.92 63.25
KRH72327 Soybean endoplasmic reticulum 61.32 62.73
KRH70484 Soybean cytosol 52.62 62.68
GSMUA_Achr5P10770_001 Banana cytosol 69.27 62.6
KRH11084 Soybean endoplasmic reticulum 52.02 54.13
KRH11083 Soybean cytosol, endoplasmic reticulum 46.93 53.23
KRH49659 Soybean endoplasmic reticulum 49.63 52.29
KRH01651 Soybean cytosol 46.63 51.66
KRH01609 Soybean cytosol 50.37 49.93
KRH01610 Soybean cytosol, endoplasmic reticulum 49.63 49.18
KRH26302 Soybean plastid 20.09 48.55
KRH10640 Soybean nucleus 48.88 48.37
KRH21710 Soybean endoplasmic reticulum 48.73 48.22
KRH49859 Soybean endoplasmic reticulum, nucleus 48.58 47.86
KRH42039 Soybean mitochondrion 48.43 47.71
KRH06058 Soybean mitochondrion 47.08 45.57
KRH26303 Soybean cytosol, endoplasmic reticulum 17.09 42.7
KRH21163 Soybean endoplasmic reticulum 30.88 42.13
KRH70355 Soybean cytosol 51.12 38.23
Protein Annotations
Gene3D:1.20.1270.10Gene3D:2.60.34.10Gene3D:3.30.420.40Gene3D:3.90.640.10MapMan:35.1EntrezGene:547838
EMBL:ACUP02004761ncoils:CoilEnsemblPlantsGene:GLYMA_08G025700GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005524InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sfInterPro:Heat_shock_70_CSInterPro:Hsp_70_famUniProt:I1KPN3
InterPro:IPR029047InterPro:IPR029048EnsemblPlants:KRH41370ProteinID:KRH41370ProteinID:KRH41370.1PFAM:PF00012
PRINTS:PR00301ScanProsite:PS00297ScanProsite:PS00329ScanProsite:PS01036PFscan:PS51257PANTHER:PTHR19375
PANTHER:PTHR19375:SF317SUPFAM:SSF100920SUPFAM:SSF100934SUPFAM:SSF53067SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0002339234SEG:seg::::
Description
hypothetical protein
Coordinates
chr8:+:2032996..2036849
Molecular Weight (calculated)
73481.4 Da
IEP (calculated)
4.808
GRAVY (calculated)
-0.429
Length
667 amino acids
Sequence
(BLAST)
001: MAGSWARRSL IVLAIISFGC LFAISIAKEE ATKLGTVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVAFTDSER LIGEAAKNQA AVNPERTIFD
101: VKRLIGRKFE DKEVQKDMKL VPYKIVNKDG KPYIQVKIKD GETKVFSPEE ISAMVLIKMK ETAEAFLGKK INDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSI LTIDNGVFEV LATNGDTHLG GEDFDQRIME YFIKLIKKKH GKDISKDNRA LGKLRREAER
301: AKRALSSQHQ VRVEIESLFD GVDFSEPLTR ARFEELNNDL FRKTMGPVKK AMEDAGLQKS QIDEIVLVGG STRIPKVQQL LKDYFDGKEP NKGVNPDEAV
401: AYGAAVQGSI LSGEGGEETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLSGIPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKGTGKSE KITITNEKGR LSQEEIDRMV REAEEFAEED KKVKERIDAR NSLETYVYNM KNQVSDKDKL ADKLESDEKE
601: KIETAVKEAL EWLDDNQSVE KEDYEEKLKE VEAVCNPIIS AVYQRSGGAP GGAGGEGEDE DDSHDEL
Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)
001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL
Arabidopsis Description
BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.