CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63497	Canola	endoplasmic reticulum	97.23	87.38
CDX77423	Canola	cytosol, endoplasmic reticulum	97.05	87.23
CDX79726	Canola	endoplasmic reticulum	96.53	86.76
CDY23972	Canola	endoplasmic reticulum	96.36	86.6
CDX84809	Canola	endoplasmic reticulum	96.36	86.6
CDY46766	Canola	endoplasmic reticulum	96.19	86.45
Bra028521.1-P	Field mustard	endoplasmic reticulum	99.13	86.02
CDY13371	Canola	cytosol, endoplasmic reticulum	98.44	84.4
AT5G28540.1	Thale cress	endoplasmic reticulum	96.36	83.11
AT5G42020.3	Thale cress	endoplasmic reticulum	94.45	80.98
KRH60086	Soybean	endoplasmic reticulum	91.85	79.34
KRH41370	Soybean	endoplasmic reticulum	91.68	79.31
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	90.81	78.56
PGSC0003DMT400047710	Potato	endoplasmic reticulum	89.95	77.69
PGSC0003DMT400031937	Potato	extracellular	89.77	77.66
Os02t0115900-02	Rice	plasma membrane	89.25	77.44
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	81.46	77.05
Zm00001d014993_P001	Maize	endoplasmic reticulum	88.39	76.92
Zm00001d054043_P007	Maize	endoplasmic reticulum	88.39	76.92
Solyc06g052050.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	82.32	76.74
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	88.56	76.61
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	79.72	76.54
TraesCS6D01G049100.1	Wheat	golgi	87.87	76.24
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	87.87	76.24
TraesCS6A01G042600.1	Wheat	golgi	87.87	76.24
KRH60091	Soybean	nucleus	90.99	74.89
KRH41372	Soybean	endoplasmic reticulum	90.64	73.87
KXG29291	Sorghum	plasma membrane	85.96	73.16
GSMUA_Achr4P11940_001	Banana	cytosol	88.56	70.78
CDY22648	Canola	cytosol	73.31	69.92
CDY06347	Canola	endoplasmic reticulum	72.79	65.42
CDY00784	Canola	cytosol	62.05	55.08
CDX73815	Canola	cytosol	62.22	55.06
CDY50531	Canola	cytosol	61.7	54.77
CDY52661	Canola	cytosol	61.35	54.71
CDY33359	Canola	cytosol	47.49	52.9
CDX83960	Canola	cytosol	59.45	52.77
CDX96825	Canola	cytosol	59.45	52.77
CDY35063	Canola	cytosol	47.14	52.51
GSMUA_Achr5P10770_001	Banana	cytosol	66.72	52.17
CDY49668	Canola	cytosol	39.69	45.98
CDY40362	Canola	cytosol, mitochondrion	34.66	44.05
CDX90397	Canola	mitochondrion	49.39	42.04
CDX85810	Canola	mitochondrion	49.22	41.76
CDX69342	Canola	mitochondrion	49.22	41.76
CDY49682	Canola	mitochondrion	49.22	41.7
CDX75683	Canola	mitochondrion	49.22	41.64
CDY11007	Canola	cytosol	44.89	41.64
CDY56552	Canola	mitochondrion	49.05	41.56
CDX81132	Canola	mitochondrion	49.05	41.56
CDY34275	Canola	cytosol	44.89	41.44
CDY24832	Canola	cytosol	44.71	41.28
CDY08914	Canola	cytosol	44.37	41.22
CDX92631	Canola	plastid	47.14	38.42
CDY03462	Canola	plastid	46.97	38.06
CDY03461	Canola	plastid	44.89	36.43
CDY03459	Canola	cytosol	41.25	35.95
CDY44807	Canola	mitochondrion	48.35	35.32
CDY49667	Canola	nucleus	2.6	20.0

Protein Annotations

Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.90.640.10	MapMan:35.1	GO:A0A078BSH1	EnsemblPlants:CDX67525
ProteinID:CDX67525	ProteinID:CDX67525.1	ncoils:Coil	EnsemblPlantsGene:GSBRNA2T00098648001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF317	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDEEB1	SEG:seg

Description

BnaA07g15650D

Coordinates

chrLK031787:-:763945..766646

Molecular Weight (calculated)

63276.0 Da

IEP (calculated)

4.549

GRAVY (calculated)

-0.355

Length

577 amino acids

Sequence
(BLAST)

001: MARSFGAVLA IIFFGFLFAS FSTAKEEEAT TKLGTVIGID LGTTYSCVGV YKNGHVEIIA NDQGNRITPS WVAFTDSARL IGEAAKNQAA VNPERTIFDV
101: KRLIGRKFED KEVQKDRKLV PYQIVNKDGK PYIQVKIKDG ETKVFSPEEI SAMILTKMKE TAEAYLGKKI KDAVVTVPAY FNDAQRQATK DAGVIAGLNV
201: ARIINEPTAA AIAYGLDKKG GEKNILVFDL GGGTFDVSVL TIDNGVFEVL STNALSSQHQ VRVEIESLFD GVDFSEPLTR ARFEELNNDL FRKTMGPVKK
301: AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV
401: IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGIPPAPR GTPQIEVTFE VDANGILNVK AEDKASEEFS EEDKKVKERI DARNSLETYV
501: YNMKNQAEEK EKIEAATKEA LEWLDENQNS EKEEYDEKLK EVEAVCNPII TAVYQRSGGA PGASPTEDEE DESHDEL

Best Arabidopsis Sequence Match ( AT1G09080.2 )
(BLAST)

001: MIFIKENTAK MTRNKAIACL VFLTALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA AKNQAAKNPE
101: RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI
201: AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK DHKALGKLRR
301: ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP
401: DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE LGKFDLTGIL
501: PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD KEKLAKKISD
601: EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL

Arabidopsis Description

MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.