CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35063	Canola	cytosol	99.03	99.03
CDX96825	Canola	cytosol	94.98	75.69
CDX83960	Canola	cytosol	94.98	75.69
AT1G16030.1	Thale cress	cytosol	93.63	75.08
CDY40362	Canola	cytosol, mitochondrion	64.29	73.35
PGSC0003DMT400029104	Potato	cytosol	82.24	69.38
KRH03029	Soybean	nucleus	85.71	68.84
KRH72327	Soybean	endoplasmic reticulum	85.14	67.64
CDY52661	Canola	cytosol	83.59	66.92
CDY50531	Canola	cytosol	83.78	66.77
VIT_11s0037g00510.t01	Wine grape	cytosol	84.36	66.62
CDY49668	Canola	cytosol	63.9	66.47
CDY00784	Canola	cytosol	83.4	66.46
CDX73815	Canola	cytosol	83.4	66.26
Solyc07g005820.2.1	Tomato	cytosol	82.63	65.44
GSMUA_Achr5P04580_001	Banana	endoplasmic reticulum	59.85	57.3
CDY13371	Canola	cytosol, endoplasmic reticulum	63.13	48.59
CDX77423	Canola	cytosol, endoplasmic reticulum	59.65	48.13
CDX79726	Canola	endoplasmic reticulum	59.65	48.13
CDY63497	Canola	endoplasmic reticulum	59.65	48.13
CDY46766	Canola	endoplasmic reticulum	59.65	48.13
CDY23972	Canola	endoplasmic reticulum	59.46	47.98
CDX84809	Canola	endoplasmic reticulum	59.46	47.98
CDX67525	Canola	endoplasmic reticulum	52.9	47.49
CDY22648	Canola	cytosol	55.21	47.27
CDY06347	Canola	endoplasmic reticulum	55.02	44.39
CDY34275	Canola	cytosol	47.68	39.52
CDY08914	Canola	cytosol	47.3	39.45
CDY24832	Canola	cytosol	47.49	39.36
CDY11007	Canola	cytosol	47.1	39.23
CDX85810	Canola	mitochondrion	48.46	36.91
CDY56552	Canola	mitochondrion	48.46	36.86
CDX81132	Canola	mitochondrion	48.46	36.86
CDX75683	Canola	mitochondrion	47.68	36.22
CDX69342	Canola	mitochondrion	47.49	36.18
CDX90397	Canola	mitochondrion	47.3	36.14
CDY49682	Canola	mitochondrion	47.3	35.98
CDY03462	Canola	plastid	47.49	34.55
CDX92631	Canola	plastid	47.1	34.46
CDY03461	Canola	plastid	45.17	32.91
CDY03459	Canola	cytosol	40.15	31.42
CDY44807	Canola	mitochondrion	47.88	31.39
CDY49667	Canola	nucleus	0.58	4.0

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:A0A078H781
UniProt:A0A078H781	EnsemblPlants:CDY33359	ProteinID:CDY33359	ProteinID:CDY33359.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00054203001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF321	SUPFAM:SSF100920	SUPFAM:SSF100934
SUPFAM:SSF53067	UniParc:UPI0004EE52B0	SEG:seg	:	:	:

Description

BnaC05g12240DBnaC05g12240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H781]

Coordinates

chrLK032312:+:246200..247937

Molecular Weight (calculated)

56694.4 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.422

Length

518 amino acids

Sequence
(BLAST)

001: MKEVAESFLG HTVKNAVVTV PAYFNDSQRQ ATKDAGSISG LNVLRIINEP TAAAIAYGLD KKGTKTGERN VLIFDLGGGT FDVSLLTIEE GVFEVKATAG
101: DTHLGGEDFD NRLVNHFVAE FKRKHKKDVS GNARALRRLR TACERAKRTL SSTAQTTIEI DSLHEGVDFY ATISRARFEE MNMDLFRKCM DPVEKVLRDA
201: KLDKSRVHEV VLVGGSTRIP KIQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILTGEG SDKVQDLLLL DVAPLSLGIE TAGGVMTVLI PRNTTVPCKK
301: EQVFSTYADN QPGVLIQVYE GERARTKDNN LLGTFELKGI PPAPRGVPQI NVCFDIDANG ILNVSAEDKT AGVKNQITIT NDKGRLSKEE IEKMVQDAEK
401: YKAEDEQVKK RVEAKNSLEN YAYNMRNTVR DEKLAQKLDQ EGKQKIEKAI DEAIEWIEGN QLAEVDEFEY KLKELEGICN PIISKMYQDG AGAGYPDGGM
501: PASGGSGGAG GPKVEEVD

Best Arabidopsis Sequence Match ( AT1G16030.1 )
(BLAST)

001: MATKSEKAIG IDLGTTYSCV GVWMNDRVEI IPNDQGNRTT PSYVAFTDTE RLIGDAAKNQ VALNPQNTVF DAKRLIGRKF SDPSVQSDIL HWPFKVVSGP
101: GEKPMIVVSY KNEEKQFSPE EISSMVLVKM KEVAEAFLGR TVKNAVVTVP AYFNDSQRQA TKDAGAISGL NVLRIINEPT AAAIAYGLDK KGTKAGEKNV
201: LIFDLGGGTF DVSLLTIEEG VFEVKATAGD THLGGEDFDN RLVNHFVAEF RRKHKKDIAG NARALRRLRT ACERAKRTLS STAQTTIEID SLHEGIDFYA
301: TISRARFEEM NMDLFRKCMD PVEKVLKDAK LDKSSVHDVV LVGGSTRIPK IQQLLQDFFN GKELCKSINP DEAVAYGAAV QAAILTGEGS EKVQDLLLLD
401: VAPLSLGLET AGGVMTVLIP RNTTVPCKKE QVFSTYADNQ PGVLIQVYEG ERARTRDNNL LGTFELKGIP PAPRGVPQIN VCFDIDANGI LNVSAEDKTA
501: GVKNQITITN DKGRLSKEEI EKMVQDAEKY KAEDEQVKKK VEAKNSLENY AYNMRNTIKD EKLAQKLTQE DKQKIEKAID ETIEWIEGNQ LAEVDEFEYK
601: LKELEGICNP IISKMYQGGA AAGGMPTDGD FSSSGAAGGP KIEEVD

Arabidopsis Description

HSP70-5Hsp70b [Source:UniProtKB/TrEMBL;Acc:A0A178W9N7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.