CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49682	Canola	mitochondrion	99.7	99.27
Bra010620.1-P	Field mustard	mitochondrion	98.67	98.96
CDX69342	Canola	mitochondrion	94.99	94.71
CDX75683	Canola	mitochondrion	94.4	93.84
AT4G37910.1	Thale cress	mitochondrion	93.36	92.82
CDY56552	Canola	mitochondrion	81.42	81.06
CDX81132	Canola	mitochondrion	81.12	80.76
CDX85810	Canola	mitochondrion	80.97	80.74
CDY44807	Canola	mitochondrion	79.35	68.1
CDY11007	Canola	cytosol	49.7	54.18
CDY08914	Canola	cytosol	49.41	53.95
CDY34275	Canola	cytosol	49.7	53.92
CDY24832	Canola	cytosol	49.41	53.6
CDX92631	Canola	plastid	52.21	50.0
CDY03462	Canola	plastid	52.51	50.0
CDX67525	Canola	endoplasmic reticulum	42.04	49.39
CDY03461	Canola	plastid	50.44	48.1
CDY22648	Canola	cytosol	42.92	48.1
CDY13371	Canola	cytosol, endoplasmic reticulum	47.64	47.99
CDY00784	Canola	cytosol	45.87	47.85
CDY63497	Canola	endoplasmic reticulum	45.28	47.82
CDY52661	Canola	cytosol	45.58	47.76
CDX73815	Canola	cytosol	45.87	47.7
CDY50531	Canola	cytosol	45.58	47.54
CDX77423	Canola	cytosol, endoplasmic reticulum	44.99	47.51
CDX79726	Canola	endoplasmic reticulum	44.84	47.35
CDY33359	Canola	cytosol	36.14	47.3
CDY35063	Canola	cytosol	35.99	47.1
CDY46766	Canola	endoplasmic reticulum	44.54	47.04
CDY23972	Canola	endoplasmic reticulum	44.4	46.88
CDX84809	Canola	endoplasmic reticulum	44.4	46.88
CDX83960	Canola	cytosol	43.81	45.69
CDX96825	Canola	cytosol	43.81	45.69
CDY06347	Canola	endoplasmic reticulum	43.07	45.48
CDY03459	Canola	cytosol	43.95	45.02
CDY40362	Canola	cytosol, mitochondrion	27.88	41.63
CDY49668	Canola	cytosol	30.53	41.57
CDY49667	Canola	nucleus	1.62	14.67

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
GO:A0A078DMW2	EnsemblPlants:CDX90397	ProteinID:CDX90397	ProteinID:CDX90397.1	InterPro:Chaperone_DnaK	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00150999001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF333
SUPFAM:SSF100920	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI0004EEB47C	SEG:seg	:

Description

BnaA08g15870D

Coordinates

chrLK031862:+:1561103..1563872

Molecular Weight (calculated)

72664.7 Da

IEP (calculated)

5.737

GRAVY (calculated)

-0.286

Length

678 amino acids

Sequence
(BLAST)

001: MASVALLRAL RRRELHTASV SAFKSVSTNG KTSLVGHFAR PFCSRPVGND VIGIDLGTTN SCVAVMEGKT PRVIENAEGT RTTPSVVAIN QKGELLVGTP
101: AKRQAVTNPT NTIFGSKRLI GRRFEDSQTQ KEMKMVPYKI VKAPNGDAWV EANGQKFSPS QIGANVLTKM KETAEAYLGK SITKAVVTVP AYFNDAQRQA
201: TKDAGKIAGL DVQRIINEPT AAALSYGMNN KEGVIAVFDL GGGTFDVSIL EISSGVFEVK ATNGDTFLGG EDFDNTLLEY LVSEFKRSDN IDLTKDKLAL
301: QRLREAAEKA KIELSSTSQT EINLPFITAD ASGAKHLNIT LTRSKFEALV GKLIERTRCP CQNCLKDAGV TVKEVDEVLL VGGMTRVPKV QEIVAEIFGK
401: SPCKGVNPDE AVAMGAAIQG GILRGDVKEL LLLDVTPLSL GIETLGGIFT RLINRNTTIP TKKSQVFSTA ADNQMQVGIK VLQGEREMAA DNKSLGEFDL
501: VGIPPAPRGM PQIEVTFDID ANGIVTVSAK DKATGKEQQI TIRSSGGLSD DEINRMVKEA ELNSHKDQEK KQLIDLRNTA DTTIYSVEKS LSEYREKIPA
601: EIASEIETAV SDLRTAMAGE EIEDIKAKLE AANKAVSKIG EHMSKGSGSS GSSGGEGSSG TDQQTPEAEF EEASGSKK

Best Arabidopsis Sequence Match ( AT4G37910.2 )
(BLAST)

001: MASVALLRSF RRREVQMASV SAFKSVSANG KNSMFGKLGY LARPFCSRPV GNDVIGIDLG TTNSCVSVME GKTARVIENA EGSRTTPSVV AMNQKGELLV
101: GTPAKRQAVT NPTNTIFGSK RLIGRRFDDP QTQKEMKMVP YKIVKAPNGD AWVEANGQKF SPSQIGANVL TKMKETAEAY LGKSINKAVV TVPAYFNDAQ
201: RQATKDAGKI AGLDVQRIIN EPTAAALSYG MNNKEGVIAV FDLGGGTFDV SILEISSGVF EVKATNGDTF LGGEDFDNTL LEYLVNEFKR SDNIDLTKDN
301: LALQRLREAA EKAKIELSST TQTEINLPFI TADASGAKHL NITLTRSKFE GLVGKLIERT RSPCQNCLKD AGVTIKEVDE VLLVGGMTRV PKVQEIVSEI
401: FGKSPCKGVN PDEAVAMGAA IQGGILRGDV KDLLLLDVVP LSLGIETLGA VFTKLIPRNT TIPTKKSQVF STAADNQMQV GIKVLQGERE MAADNKVLGE
501: FDLVGIPPAP RGMPQIEVTF DIDANGITTV SAKDKATGKE QNITIRSSGG LSDDEINRMV KEAELNAQKD QEKKQLIDLR NSADTTIYSV EKSLSEYREK
601: IPAEIASEIE TAVSDLRTAM AGEDVEDIKA KVEAANKAVS KIGEHMSKGS GSSGSDGSSG EGTSGTEQTP EAEFEEASGS RK

Arabidopsis Description

HSP70-9Heat shock 70 kDa protein 9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.