CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96825	Canola	cytosol	98.92	98.92
CDY33359	Canola	cytosol	75.69	94.98
CDY35063	Canola	cytosol	75.69	94.98
AT1G16030.1	Thale cress	cytosol	93.23	93.81
KRH03029	Soybean	nucleus	86.15	86.82
KRH72327	Soybean	endoplasmic reticulum	86.46	86.2
VIT_11s0037g00510.t01	Wine grape	cytosol	85.85	85.06
PGSC0003DMT400029104	Potato	cytosol	79.69	84.36
CDY52661	Canola	cytosol	83.85	84.23
CDY50531	Canola	cytosol	83.85	83.85
CDY00784	Canola	cytosol	83.54	83.54
Solyc07g005820.2.1	Tomato	cytosol	83.85	83.33
CDX73815	Canola	cytosol	83.38	83.13
GSMUA_Achr5P04580_001	Banana	endoplasmic reticulum	62.15	74.68
CDY40362	Canola	cytosol, mitochondrion	52.15	74.67
CDY49668	Canola	cytosol	56.31	73.49
CDY22648	Canola	cytosol	55.54	59.67
CDX67525	Canola	endoplasmic reticulum	52.77	59.45
CDY63497	Canola	endoplasmic reticulum	58.46	59.19
CDX77423	Canola	cytosol, endoplasmic reticulum	58.31	59.03
CDY23972	Canola	endoplasmic reticulum	58.31	59.03
CDX79726	Canola	endoplasmic reticulum	58.31	59.03
CDX84809	Canola	endoplasmic reticulum	58.31	59.03
CDY46766	Canola	endoplasmic reticulum	58.31	59.03
CDY13371	Canola	cytosol, endoplasmic reticulum	60.46	58.4
CDY06347	Canola	endoplasmic reticulum	55.69	56.39
CDY08914	Canola	cytosol	43.85	45.89
CDY24832	Canola	cytosol	44.0	45.76
CDY11007	Canola	cytosol	43.69	45.66
CDY34275	Canola	cytosol	43.69	45.44
CDX85810	Canola	mitochondrion	47.08	45.0
CDY56552	Canola	mitochondrion	47.08	44.93
CDX81132	Canola	mitochondrion	47.08	44.93
CDX90397	Canola	mitochondrion	45.69	43.81
CDY49682	Canola	mitochondrion	45.69	43.61
CDX75683	Canola	mitochondrion	45.08	42.96
CDX69342	Canola	mitochondrion	44.92	42.94
CDX92631	Canola	plastid	45.54	41.81
CDY03462	Canola	plastid	45.54	41.57
CDY03461	Canola	plastid	43.85	40.08
CDY03459	Canola	cytosol	38.92	38.22
CDY44807	Canola	mitochondrion	45.69	37.59
CDY49667	Canola	nucleus	2.31	20.0

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
GO:A0A078D461	EnsemblPlants:CDX83960	ProteinID:CDX83960	ProteinID:CDX83960.1	ncoils:Coil	EnsemblPlantsGene:GSBRNA2T00139742001
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF321	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI0004EEFDFB	SEG:seg

Description

BnaC08g16850D

Coordinates

chrLK031834:+:1443900..1446105

Molecular Weight (calculated)

71439.7 Da

IEP (calculated)

5.005

GRAVY (calculated)

-0.442

Length

650 amino acids

Sequence
(BLAST)

001: MTTKSEKAVG IDLGTTYSCV GVWMNDRVEI IPNDQGNRTT PSYVAFTDTE RLIGDSAKNQ VALNPHNTVF DAKRLIGRRF SDPSVQSDMT HWPFKVVSGP
101: GDKPMIVVSY KNEEKQFSPE EISSMVLIKM REVAESFLGH AVKNAVVTVP AYFNDSQRQA TKDAGSISGL NVLRIINEPT AAAIAYGLDK KGTQTGERNV
201: LIFDLGGGTF DVSLLTIEEG VFEVKATAGD THLGGEDFDN RLVNHFVAEF RRKHKKDISG NARALRRLRT ACERAKRTLS STAQTTIEID SLYEGVDFYA
301: TISRARFEEM NMDLFRKCMD PVEKVLRDAK IDKNRVHEVV LVGGSTRIPK IQQLLQDFFN GKELCKSINP DEAVAYGAAV QAAILTGEGS EKVQDLLLLD
401: VAPLSLGLET AGGVMTVLIP RNTTVPCKKE QVFSTYSDNQ PGVLIQVYEG ERARTRDNNL LGTFELKGIP PAPRGVPQIN VCFDIDANGI LNVSAEDKTA
501: GVKNQITITN DKGRLSKEEI EKMVQDAEKY KAEDEQVKKR VEAKNSLENY AYNMRNTVKD EKLAQKLDQE DKQKIEKAID ETIEWIEGNQ LAEVDEFEYK
601: LKELEGICSP IISKMYQGGA SAGGANDGMP GDGGSGGSGG GQGPKIEEVD

Best Arabidopsis Sequence Match ( AT1G16030.1 )
(BLAST)

001: MATKSEKAIG IDLGTTYSCV GVWMNDRVEI IPNDQGNRTT PSYVAFTDTE RLIGDAAKNQ VALNPQNTVF DAKRLIGRKF SDPSVQSDIL HWPFKVVSGP
101: GEKPMIVVSY KNEEKQFSPE EISSMVLVKM KEVAEAFLGR TVKNAVVTVP AYFNDSQRQA TKDAGAISGL NVLRIINEPT AAAIAYGLDK KGTKAGEKNV
201: LIFDLGGGTF DVSLLTIEEG VFEVKATAGD THLGGEDFDN RLVNHFVAEF RRKHKKDIAG NARALRRLRT ACERAKRTLS STAQTTIEID SLHEGIDFYA
301: TISRARFEEM NMDLFRKCMD PVEKVLKDAK LDKSSVHDVV LVGGSTRIPK IQQLLQDFFN GKELCKSINP DEAVAYGAAV QAAILTGEGS EKVQDLLLLD
401: VAPLSLGLET AGGVMTVLIP RNTTVPCKKE QVFSTYADNQ PGVLIQVYEG ERARTRDNNL LGTFELKGIP PAPRGVPQIN VCFDIDANGI LNVSAEDKTA
501: GVKNQITITN DKGRLSKEEI EKMVQDAEKY KAEDEQVKKK VEAKNSLENY AYNMRNTIKD EKLAQKLTQE DKQKIEKAID ETIEWIEGNQ LAEVDEFEYK
601: LKELEGICNP IISKMYQGGA AAGGMPTDGD FSSSGAAGGP KIEEVD

Arabidopsis Description

HSP70-5Hsp70b [Source:UniProtKB/TrEMBL;Acc:A0A178W9N7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.