CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028628.1-P	Field mustard	mitochondrion	82.91	96.32
CDX85810	Canola	mitochondrion	82.91	96.32
CDX81132	Canola	mitochondrion	81.01	93.98
CDY56552	Canola	mitochondrion	81.01	93.98
AT5G09590.1	Thale cress	mitochondrion	79.49	92.08
KRH21710	Soybean	endoplasmic reticulum	72.53	85.01
KRH10640	Soybean	nucleus	72.41	84.87
KRH42039	Soybean	mitochondrion	72.28	84.34
KRH49859	Soybean	endoplasmic reticulum, nucleus	72.03	84.05
VIT_03s0097g00530.t01	Wine grape	mitochondrion	72.15	83.95
PGSC0003DMT400027703	Potato	mitochondrion	71.39	83.31
Solyc01g106210.2.1	Tomato	plastid	71.01	82.38
EER91365	Sorghum	mitochondrion	70.51	82.15
Zm00001d013842_P003	Maize	mitochondrion	70.38	82.01
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	70.25	81.86
Solyc01g106260.2.1	Tomato	plastid	69.11	81.49
Os02t0774300-01	Rice	mitochondrion	69.75	81.15
PGSC0003DMT400008101	Potato	mitochondrion	69.11	81.01
Os03t0113700-01	Rice	mitochondrion	69.11	80.77
TraesCSU01G116400.1	Wheat	mitochondrion	68.23	80.21
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	68.23	79.85
TraesCS1A01G295600.1	Wheat	mitochondrion	68.86	79.65
CDX90397	Canola	mitochondrion	68.1	79.35
CDY49682	Canola	mitochondrion	68.35	79.3
TraesCS4B01G397600.1	Wheat	mitochondrion	67.85	79.17
GSMUA_Achr4P19830_001	Banana	mitochondrion	68.23	79.15
TraesCS3A01G305100.3	Wheat	mitochondrion	68.48	79.09
TraesCS3D01G296700.1	Wheat	golgi	68.35	79.06
TraesCS3B01G331400.4	Wheat	mitochondrion	68.23	78.8
HORVU4Hr1G089090.8	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	67.09	78.29
CDX69342	Canola	mitochondrion	67.34	78.24
CDX75683	Canola	mitochondrion	67.22	77.86
HORVU3Hr1G073230.9	Barley	endoplasmic reticulum, golgi	67.47	76.36
HORVU0Hr1G006930.3	Barley	cytosol	46.2	76.2
CDY08914	Canola	cytosol	42.53	54.11
CDY34275	Canola	cytosol	42.78	54.08
CDY11007	Canola	cytosol	42.53	54.02
CDY24832	Canola	cytosol	42.66	53.92
CDX92631	Canola	plastid	45.06	50.28
CDY03462	Canola	plastid	45.19	50.14
CDX67525	Canola	endoplasmic reticulum	35.32	48.35
CDY33359	Canola	cytosol	31.39	47.88
CDY00784	Canola	cytosol	39.24	47.69
CDY52661	Canola	cytosol	38.99	47.6
CDY03461	Canola	plastid	42.78	47.54
CDY35063	Canola	cytosol	31.14	47.49
CDX73815	Canola	cytosol	39.11	47.39
CDY50531	Canola	cytosol	38.99	47.38
CDY63497	Canola	endoplasmic reticulum	38.35	47.2
CDY22648	Canola	cytosol	36.08	47.11
CDX84809	Canola	endoplasmic reticulum	38.23	47.04
CDX79726	Canola	endoplasmic reticulum	38.23	47.04
CDX77423	Canola	cytosol, endoplasmic reticulum	38.23	47.04
CDY23972	Canola	endoplasmic reticulum	38.23	47.04
CDY46766	Canola	endoplasmic reticulum	38.1	46.88
CDY13371	Canola	cytosol, endoplasmic reticulum	39.62	46.51
CDX96825	Canola	cytosol	37.59	45.69
CDX83960	Canola	cytosol	37.59	45.69
CDY03459	Canola	cytosol	37.97	45.32
CDY06347	Canola	endoplasmic reticulum	36.33	44.7
CDY40362	Canola	cytosol, mitochondrion	24.43	42.51
CDY49668	Canola	cytosol	25.32	40.16
CDY49667	Canola	nucleus	1.39	14.67

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	MapMan:7.11.2.2.5
GO:A0A078I415	UniProt:A0A078I415	EnsemblPlants:CDY44807	ProteinID:CDY44807	ProteinID:CDY44807.1	InterPro:Chaperone_DnaK
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00080816001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297
ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF333	SUPFAM:SSF100920	SUPFAM:SSF53067
TMHMM:TMhelix	UniParc:UPI0004EEF932	SEG:seg	:	:	:

Description

BnaC02g00800DBnaC02g00800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I415]

Coordinates

chrLK032601:+:214389..219218

Molecular Weight (calculated)

84951.0 Da

IEP (calculated)

6.687

GRAVY (calculated)

-0.261

Length

790 amino acids

Sequence
(BLAST)

001: MATAALLRSI RRREVASTPF SAFKCLWSTG KASSNGSYHA QNWRSFSRAF SSKPAGNDVI GIDLGTTNSC VAVMEGKNPK VIENAEGART TPSVVAFNPK
101: GELLVGTPAK RQAVTNPTNT LFGTKRLIGR KFDDPQTQKE MKMVPYRIVR APNGDAWVEA NGVFPWRFIR VVSRDKVWFL GICGFVGGCG WGVFVERALI
201: WIEGSSGFLW YVGQGRFMEG SYLSSACYRV ALPVRCIAAN RTLSSGGVPS ISKNCSHLDN QSRSSVPSKA GKIIFERREV GECDSACDKE TAEAYLGKSV
301: KKAVVTVPAY FNDAQRQATK DAGRIAGLDV ERIINEPTAA ALSYGMTNKE GLIAVFDLGG GTFDVSVLEI SNGVFEVKAT NGDTFLGGED FDNALLDFLV
401: NEFKTSEGID LARDRLALQR LREAAEKAKI ELSSTSQTEI NLPFITADAS GAKHFNITLT RSKFETLVNN LIERTREPCK NCLKDAGISA KEVDEVLLVG
501: GMTRVPKVQS VVAEIFGKTP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGVFTRL IGRNTTIPTK KSQVFSTAAD NQTQVGIKVL
601: QGEREMASDN KLLGEFDLVG IPPSPRGIPQ IEVTFDIDAN GIVTVSAKDK TTGKEQQITI RSSGGLSEDD IQKMVRDAEL HAQKDKERKD LIDTKNTADT
701: TIYSIEKSLG EYREKIPGEV AKEIEDAVAD LRSASAGDDV NEIKAKIDAA NKAVSKIGEH MSGGGSAPGG GAQGGGSDQT PEADYEEVKK

Best Arabidopsis Sequence Match ( AT4G24280.1 )
(BLAST)

001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ

Arabidopsis Description

HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.