Factsheet for TraesCS2D01G575200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

plastid: 19643044
mitochondrion: 21043471
plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

msms PMID: 19643044 doi

DY Hou, H Xu, GY Du, JT Lin, M Duan, AG Guo

College of Life Science, Northwest A&F University, Yangling, Shaanxi 712100, P. R. China.

msms PMID: 21043471 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks, M316, The University of Western Australia, 35 Stirling Highway, Crawley,WA 6009, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G397600.1	Wheat	mitochondrion	96.15	95.86
HORVU4Hr1G089090.8	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	93.19	92.91
Os03t0113700-01	Rice	mitochondrion	91.11	90.98
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	88.74	88.35
EER91365	Sorghum	mitochondrion	88.44	88.05
Zm00001d013842_P003	Maize	mitochondrion	88.3	87.91
TraesCS3D01G296700.1	Wheat	golgi	88.0	86.97
VIT_03s0097g00530.t01	Wine grape	mitochondrion	85.19	84.68
GSMUA_Achr3P12480_001	Banana	mitochondrion	76.0	83.96
KRH10640	Soybean	nucleus	82.96	83.09
KRH21710	Soybean	endoplasmic reticulum	82.96	83.09
KRH42039	Soybean	mitochondrion	82.96	82.72
KRH49859	Soybean	endoplasmic reticulum, nucleus	82.67	82.42
PGSC0003DMT400027703	Potato	mitochondrion	82.37	82.13
VIT_00s0415g00030.t01	Wine grape	mitochondrion	82.67	81.82
Solyc01g106210.2.1	Tomato	plastid	82.52	81.79
Solyc01g106260.2.1	Tomato	plastid	81.04	81.64
PGSC0003DMT400008101	Potato	mitochondrion	80.89	81.01
Bra028628.1-P	Field mustard	mitochondrion	80.89	80.29
CDY56552	Canola	mitochondrion	80.89	80.18
CDX81132	Canola	mitochondrion	80.89	80.18
CDX85810	Canola	mitochondrion	80.74	80.15
Bra006027.1-P	Field mustard	mitochondrion	80.59	79.88
AT5G09590.1	Thale cress	mitochondrion	80.44	79.62
TraesCS5D01G276100.1	Wheat	mitochondrion	77.78	76.75
CDY44807	Canola	mitochondrion	79.85	68.23
TraesCS1D01G131800.1	Wheat	plastid	51.7	51.17
TraesCS5D01G117600.1	Wheat	plastid	52.15	51.01
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	43.26	48.03
TraesCS6D01G049100.1	Wheat	golgi	46.96	47.67
TraesCS5D01G093900.1	Wheat	cytosol, mitochondrion, nucleus	45.19	47.14
TraesCS4D01G207500.1	Wheat	cytosol	45.33	47.0
TraesCS6D01G317700.1	Wheat	cytosol	45.04	46.99
TraesCS5D01G492900.2	Wheat	cytosol	45.04	46.91
TraesCS1D01G284000.2	Wheat	cytosol, golgi	45.04	46.91
TraesCS4D01G140800.1	Wheat	cytosol, nucleus	45.04	46.91
TraesCS3D01G352400.2	Wheat	cytosol, golgi	44.89	46.83
TraesCS3D01G351900.1	Wheat	cytosol	45.04	46.63
TraesCS6D01G402500.1	Wheat	cytosol	35.7	46.53
TraesCS4D01G206600.1	Wheat	cytosol	44.59	45.81
TraesCS7D01G423100.1	Wheat	endoplasmic reticulum	44.3	45.3
TraesCS6D01G322800.1	Wheat	cytosol	34.22	45.03
TraesCS6D01G322700.1	Wheat	cytosol	29.93	44.99
TraesCS2D01G600900.1	Wheat	endoplasmic reticulum	44.0	44.46
TraesCS1D01G452500.1	Wheat	cytosol	33.33	43.35
TraesCS4D01G207100.1	Wheat	cytosol	30.67	42.51
TraesCS6D01G339700.1	Wheat	cytosol	35.11	39.43
TraesCS3D01G262800.1	Wheat	cytosol	33.33	36.65
TraesCS6D01G339800.1	Wheat	nucleus	33.63	28.63
TraesCS6D01G339600.1	Wheat	cytosol	37.48	27.26

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF333	SUPFAM:SSF100920	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	EnsemblPlantsGene:TraesCS2D01G575200	EnsemblPlants:TraesCS2D01G575200.1
TIGR:cd11733	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:639425710..639431590

Molecular Weight (calculated)

72124.7 Da

IEP (calculated)

4.941

GRAVY (calculated)

-0.280

Length

675 amino acids

Sequence
(BLAST)

001: MATSLLLRAV RRRDIASPLA TLTANVQSTY AAANVCSART FSAKPIGNEV IGIDLGTTNS CVAVMEGKDA KVIENSEGAR TTPSVVAFSP KGELLVGIPA
101: KRQAVTNPQN TFFGTKRMIG RRFDDPQTQK EMNMVPYKIV KAPNGDAWVE TTDGKQYSPS QIGGFVLTKM KETAESYLGK SISKAVITVP AYFNDAQRQA
201: TKDAGRIAGL DVQRIINEPT AAALSYGTNN KEGLIAVFDL GGGTFDVSIL EISNGVFEVK ATNGDTFLGG EDFDNTLLEF LVSEYKNTEN IDLSKDRLAL
301: QRLREAAEKA KIELSSTTQT EINLPFITAD ASGAKHLNIT LTRSKFESLV NSLIERTREP CKSCLKDAGI TTKDVDEVLL VGGMTRVPKV QEIVSEIFGK
401: APSKGVNPDE AVAMGAAIQG GILRGDVKEL LLLDVTPLSL GIETLGGIFT RLISRNTTIP TKKSQVFSTA ADNQTQVGIK VLQGEREMAS DNKLLGEFDL
501: VGIPPAPRGT PQVEVTFDID ANGIVTVSAK DKATGKEQQI TIRSSGGLSE AEVQKMVQEA EVHSHKDQER KALIDVRNTA DTTIYSVEKS LGEYRDKVPA
601: EVVSEIEAAV AELRAEMASD DAEKIKAKMD AANRAVSKIG QHMSGGGGGA AGDEPGSQGG GGDEAPEAEY EEVKK

Best Arabidopsis Sequence Match ( AT5G09590.1 )
(BLAST)

001: MATAALLRSI RRREVVSSPF SAYRCLSSSG KASLNSSYLG QNFRSFSRAF SSKPAGNDVI GIDLGTTNSC VAVMEGKNPK VIENAEGART TPSVVAFNTK
101: GELLVGTPAK RQAVTNPTNT VSGTKRLIGR KFDDPQTQKE MKMVPYKIVR APNGDAWVEA NGQQYSPSQI GAFILTKMKE TAEAYLGKSV TKAVVTVPAY
201: FNDAQRQATK DAGRIAGLDV ERIINEPTAA ALSYGMTNKE GLIAVFDLGG GTFDVSVLEI SNGVFEVKAT NGDTFLGGED FDNALLDFLV NEFKTTEGID
301: LAKDRLALQR LREAAEKAKI ELSSTSQTEI NLPFITADAS GAKHFNITLT RSRFETLVNH LIERTRDPCK NCLKDAGISA KEVDEVLLVG GMTRVPKVQS
401: IVAEIFGKSP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGVFTRL ITRNTTIPTK KSQVFSTAAD NQTQVGIRVL QGEREMATDN
501: KLLGEFDLVG IPPSPRGVPQ IEVTFDIDAN GIVTVSAKDK TTGKVQQITI RSSGGLSEDD IQKMVREAEL HAQKDKERKE LIDTKNTADT TIYSIEKSLG
601: EYREKIPSEI AKEIEDAVAD LRSASSGDDL NEIKAKIEAA NKAVSKIGEH MSGGSGGGSA PGGGSEGGSD QAPEAEYEEV KK

Arabidopsis Description

HSP70-10Heat shock 70 kDa protein 10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.