Factsheet for TraesCS1D01G452500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G600900.1	Wheat	endoplasmic reticulum	94.99	73.8
HORVU2Hr1G122760.1	Barley	endoplasmic reticulum	94.61	73.61
HORVU2Hr1G122800.1	Barley	extracellular, golgi	89.21	69.94
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	65.9	56.25
TraesCS7D01G423100.1	Wheat	endoplasmic reticulum	70.33	55.3
TraesCS6D01G049100.1	Wheat	golgi	68.21	53.23
TraesCS1D01G284000.2	Wheat	cytosol, golgi	56.26	45.06
TraesCS3D01G352400.2	Wheat	cytosol, golgi	56.07	44.98
TraesCS3D01G351900.1	Wheat	cytosol	56.07	44.63
TraesCS5D01G093900.1	Wheat	cytosol, mitochondrion, nucleus	54.91	44.05
TraesCS6D01G317700.1	Wheat	cytosol	54.91	44.05
TraesCS4D01G206600.1	Wheat	cytosol	55.68	43.99
TraesCS4D01G140800.1	Wheat	cytosol, nucleus	54.91	43.98
TraesCS5D01G492900.2	Wheat	cytosol	54.53	43.67
TraesCS4D01G207500.1	Wheat	cytosol	54.34	43.32
TraesCS6D01G402500.1	Wheat	cytosol	38.73	38.8
TraesCS4D01G207100.1	Wheat	cytosol	36.22	38.6
TraesCS6D01G322700.1	Wheat	cytosol	33.14	38.31
TraesCS6D01G322800.1	Wheat	cytosol	37.57	38.01
TraesCS6D01G339700.1	Wheat	cytosol	42.0	36.27
TraesCS1D01G131800.1	Wheat	plastid	44.7	34.02
TraesCS5D01G117600.1	Wheat	plastid	44.51	33.48
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	43.35	33.33
TraesCS3D01G296700.1	Wheat	golgi	43.16	32.8
TraesCS5D01G276100.1	Wheat	mitochondrion	42.97	32.6
TraesCS3D01G262800.1	Wheat	cytosol	38.15	32.25
TraesCS6D01G339800.1	Wheat	nucleus	39.11	25.6
TraesCS6D01G339600.1	Wheat	cytosol	43.35	24.25

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	ncoils:Coil
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF317
SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS1D01G452500	EnsemblPlants:TraesCS1D01G452500.1	SEG:seg

Description

No Description!

Coordinates

chr1D:-:493951919..493953699

Molecular Weight (calculated)

56537.6 Da

IEP (calculated)

4.696

GRAVY (calculated)

-0.465

Length

519 amino acids

Sequence
(BLAST)

001: MKLLPFKVMD KNGKPHVEVE VKAGDVPALS QDEDKVRDAV ITIPAYFNDA QRQATKDAGL NVVRLINEPT AAAIAYGLDK VADGKERNVL VFDLGGGTFD
101: VSVLALDGGV FEVLATNGDT HLGGEDFDQR VMDHFIRLVK RKHGVDISGD ARALGKLRRE CERAKRALST QLQVRVEVES LADGFDLSEP LTRARFEELN
201: ADLFRKVMAH VKKAMADAGL AKGDVDEVVL VGGSTRIPKV QQLLRDYFGG KEPHKGVNPD EAVAYGAAVQ GGIVRGDARE VVVLDVTPLT LGIETAGGVM
301: ASVIPRNMPI PTKRTKMFTT YEDRQTTVTI TVFEGERSMT KDNRLLGKFD LTGIAPAPRG TPQIEVTLEV DVNGILHVGA ADKGTGRSKK IGISSAGRSI
401: SQEEIERMVQ EAEDFAEEDR KVRDKVDARN QLESYVYSAR TTADGELGAK MDGGDREKVR EAAREASEWL EANPDADKDD YAEKKELEDV CSPAFADAYR
501: STDGGHDDAG EEDNDHDEL

Best Arabidopsis Sequence Match ( AT1G09080.1 )
(BLAST)

001: MIFIKENTAK MTRNKAIACL VFLTVLDFLM NIGAALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA
101: AKNQAAKNPE RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ
201: RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK
301: DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD
401: GKEPSKGTNP DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE
501: LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD
601: KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL

Arabidopsis Description

MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.