Factsheet for TraesCS5D01G276100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G268100.1	Wheat	mitochondrion	99.42	99.42
HORVU3Hr1G030980.2	Barley	cytosol	87.28	96.6
HORVU4Hr1G012460.2	Barley	cytosol, peroxisome	90.94	93.82
Os09t0491772-01	Rice	mitochondrion	90.79	90.79
Zm00001d006036_P001	Maize	mitochondrion	88.16	88.55
EER99104	Sorghum	mitochondrion	87.57	88.35
HORVU5Hr1G073730.1	Barley	plastid	83.63	86.93
TraesCS5B01G267900.1	Wheat	peroxisome	98.54	83.73
GSMUA_Achr6P36350_001	Banana	mitochondrion	62.43	80.72
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	76.75	77.78
TraesCS3D01G296700.1	Wheat	golgi	77.19	77.31
TraesCS1D01G131800.1	Wheat	plastid	51.75	51.91
TraesCS5D01G117600.1	Wheat	plastid	51.46	51.01
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	43.13	48.52
TraesCS6D01G049100.1	Wheat	golgi	46.2	47.52
TraesCS5D01G492900.2	Wheat	cytosol	44.59	47.07
TraesCS3D01G352400.2	Wheat	cytosol, golgi	44.3	46.83
TraesCS3D01G351900.1	Wheat	cytosol	44.44	46.63
TraesCS1D01G284000.2	Wheat	cytosol, golgi	44.01	46.45
TraesCS4D01G140800.1	Wheat	cytosol, nucleus	44.01	46.45
TraesCS4D01G207500.1	Wheat	cytosol	44.15	46.39
TraesCS5D01G093900.1	Wheat	cytosol, mitochondrion, nucleus	43.86	46.37
TraesCS4D01G206600.1	Wheat	cytosol	44.44	46.27
TraesCS6D01G317700.1	Wheat	cytosol	43.71	46.21
TraesCS6D01G402500.1	Wheat	cytosol	34.94	46.14
TraesCS7D01G423100.1	Wheat	endoplasmic reticulum	44.01	45.61
TraesCS6D01G322800.1	Wheat	cytosol	33.77	45.03
TraesCS6D01G322700.1	Wheat	cytosol	29.53	44.99
TraesCS2D01G600900.1	Wheat	endoplasmic reticulum	43.57	44.61
TraesCS4D01G207100.1	Wheat	cytosol	30.99	43.53
TraesCS1D01G452500.1	Wheat	cytosol	32.6	42.97
TraesCS6D01G339700.1	Wheat	cytosol	35.38	40.27
TraesCS3D01G262800.1	Wheat	cytosol	31.58	35.18
TraesCS6D01G339800.1	Wheat	nucleus	34.36	29.63
TraesCS6D01G339600.1	Wheat	cytosol	36.84	27.16

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF333	SUPFAM:SSF100920	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	EnsemblPlantsGene:TraesCS5D01G276100	EnsemblPlants:TraesCS5D01G276100.1
TIGR:cd11733	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:378890178..378892892

Molecular Weight (calculated)

72745.6 Da

IEP (calculated)

6.038

GRAVY (calculated)

-0.271

Length

684 amino acids

Sequence
(BLAST)

001: MAIGSLLASR LARSGHALAT RAIAQAPRTH NHHHATSPLL SRLGAVARAF SSRPAAADVI GIDLGTTNSC VSVMEGKTPR VIENAEGART TPSIVATNSK
101: GEILIGITAS RQAVTNAENT VRGSKRLIGR AFDDPQTQKE MKMVPYKIVR GTNGDAWVEM AGKSYSPSQI GAFVLTKMKE TAEAYLGKSV SKAVITVPAY
201: FNDAQRQATK DAGRIAGLEV MRIINEPTAA ALSYGMNNKE GLIAVFDLGG GTFDVSILEI SNGVFEVKAT NGDTFLGGED FDATLLNYLV SEYKNSDNID
301: LSKDKLALQR LREAAEKAKV ELSSTPQTEI NLPFITADAS GAKHFNITLT RSKFESLVGN LIERTRIPCT NCLKDAGVSA KEIDEVLLVG GMTRVPKVQD
401: IVSQIFGKSP SKGVNPDEAV AMGAAIQGGI LRGDVKELLL LDVTPLSLGI ETLGGIFTRL INRNTTIPTK KSQTFSTAAD NQTQVGIKVL QGEREMATDN
501: KLLGEFQLEG IPPAPRGMPQ IEVTFDIDAN GIVKVSAKDK STGKEQDITI KSSGGLSDSD IEKMVKEAEL NSQRDQERKS LIDLRNSADT TIYSIEKSVS
601: EYKDKVPAEV VTEIQSAVSD LRAAMAGDDS DAIKQKLEAA NKAVSKIGQH MQGGGGAAAG DSGSSGGGDQ TPEAEYQDPK EAKM

Best Arabidopsis Sequence Match ( AT4G24280.1 )
(BLAST)

001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ

Arabidopsis Description

HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.