Factsheet for Zm00001d006036_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99104	Sorghum	mitochondrion	97.8	98.23
Os09t0491772-01	Rice	mitochondrion	93.39	92.98
HORVU3Hr1G030980.2	Barley	cytosol	81.06	89.32
TraesCS5A01G268100.1	Wheat	mitochondrion	88.55	88.16
TraesCS5D01G276100.1	Wheat	mitochondrion	88.55	88.16
HORVU4Hr1G012460.2	Barley	cytosol, peroxisome	84.29	86.58
HORVU5Hr1G073730.1	Barley	plastid	77.68	80.4
GSMUA_Achr6P36350_001	Banana	mitochondrion	62.41	80.34
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	78.71	79.06
Zm00001d013842_P003	Maize	mitochondrion	78.56	78.91
TraesCS5B01G267900.1	Wheat	peroxisome	88.4	74.78
Zm00001d013507_P001	Maize	plastid	51.25	51.1
Zm00001d033591_P001	Maize	plastid	51.1	50.95
Zm00001d023802_P001	Maize	plastid	50.81	49.22
Zm00001d041119_P001	Maize	plastid	50.51	48.93
Zm00001d028639_P001	Maize	cytosol	38.33	48.33
Zm00001d010529_P001	Maize	cytosol	45.52	47.77
Zm00001d014993_P001	Maize	endoplasmic reticulum	46.26	47.51
Zm00001d047799_P002	Maize	cytosol, extracellular, plasma membrane, plastid	45.37	47.39
Zm00001d012420_P001	Maize	plasma membrane	45.08	47.38
Zm00001d042922_P002	Maize	cytosol	45.08	47.38
Zm00001d054043_P007	Maize	endoplasmic reticulum	46.11	47.36
Zm00001d048687_P002	Maize	cytosol, extracellular, plasma membrane	35.24	46.6
Zm00001d041550_P005	Maize	cytosol	44.05	46.23
Zm00001d030725_P003	Maize	plasma membrane	43.76	45.92
Zm00001d028630_P005	Maize	cytosol, extracellular, nucleus, plasma membrane, plastid	43.47	45.61

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
EMBL:BT088115	UniProt:C4JBB8	InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005774	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0008270	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719
GO:GO:0009735	GO:GO:0009987	GO:GO:0016020	GO:GO:0030312	GO:GO:0046686	GO:GO:0051082
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
HAMAP:MF_00332	ProteinID:ONM22625.1	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329
ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF333	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067
TIGRFAMs:TIGR02350	UniParc:UPI0001A4C77B	EnsemblPlantsGene:Zm00001d006036	EnsemblPlants:Zm00001d006036_P001	EnsemblPlants:Zm00001d006036_T001	SEG:seg

Description

Heat shock 70 kDa protein 9 mitochondrial

Coordinates

chr2:-:195892796..195896275

Molecular Weight (calculated)

72748.1 Da

IEP (calculated)

5.435

GRAVY (calculated)

-0.241

Length

681 amino acids

Sequence
(BLAST)

001: MAFGALVTSR LVRSGHTLAS AVAQGPVAQR IAPPLLSRLG AVARLLSTKP AATDVIGIDL GTTNSCVSVM EGKTPRVIEN AEGARTTPSI VAKNQNGDLL
101: IGITASRQAV TNAQNTIRGS KRLIGRTFDD PQTQKEMKMV PYKIVKAPNG DAWVEMGGQQ YSPSQIGAFV LTKMKETAEA YLGKTVSKAV ITVPAYFNDA
201: QRQATKDAGR IAGLEVMRII NEPTAAALSY GMNNKEGLIA VFDLGGGTFD VSILEISNGV FEVKATNGDT FLGGEDFDGA LLEYLVSEFK KSDNIDLSKD
301: KLALQRLREA AEKAKVELSS TMQTEINLPF ITADASGAKH FNITLTRSKF ESLVSNLIER TRIPCVNCLK DAGISAKEID EVLLVGGMTR VPKVQEVVSQ
401: IFNKPPSKGV NPDEAVAMGA AIQGGILRGD VKELLLLDVT PLSLGIETLG GIFTRLINRN TTIPTKKSQV FSTAADNQTQ VGVKVLQGER EMATDNKLLG
501: EFQLEGIPPA PRGMPQIEVT FDIDANGIVK VSARDKATGK EQEITIKSSG GLSEVEIEKM VKEAELHSQK DQERKSLIDL KNSADTTIYS IEKSVSEYKD
601: KVPAEVTKEI ESAVSDLRAA MAEDDLDKIK QKLEAANKAV SKIGEHMQQG GGSGSAGGSG SSSGGDQTPE AEYQDAKEAK M

Best Arabidopsis Sequence Match ( AT5G09590.1 )
(BLAST)

001: MATAALLRSI RRREVVSSPF SAYRCLSSSG KASLNSSYLG QNFRSFSRAF SSKPAGNDVI GIDLGTTNSC VAVMEGKNPK VIENAEGART TPSVVAFNTK
101: GELLVGTPAK RQAVTNPTNT VSGTKRLIGR KFDDPQTQKE MKMVPYKIVR APNGDAWVEA NGQQYSPSQI GAFILTKMKE TAEAYLGKSV TKAVVTVPAY
201: FNDAQRQATK DAGRIAGLDV ERIINEPTAA ALSYGMTNKE GLIAVFDLGG GTFDVSVLEI SNGVFEVKAT NGDTFLGGED FDNALLDFLV NEFKTTEGID
301: LAKDRLALQR LREAAEKAKI ELSSTSQTEI NLPFITADAS GAKHFNITLT RSRFETLVNH LIERTRDPCK NCLKDAGISA KEVDEVLLVG GMTRVPKVQS
401: IVAEIFGKSP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGVFTRL ITRNTTIPTK KSQVFSTAAD NQTQVGIRVL QGEREMATDN
501: KLLGEFDLVG IPPSPRGVPQ IEVTFDIDAN GIVTVSAKDK TTGKVQQITI RSSGGLSEDD IQKMVREAEL HAQKDKERKE LIDTKNTADT TIYSIEKSLG
601: EYREKIPSEI AKEIEDAVAD LRSASSGDDL NEIKAKIEAA NKAVSKIGEH MSGGSGGGSA PGGGSEGGSD QAPEAEYEEV KK

Arabidopsis Description

HSP70-10Heat shock 70 kDa protein 10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.