Factsheet for Zm00001d023802_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 20089766
extracellular: 20408568
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15917	Sorghum	plastid	98.58	98.72
Zm00001d041119_P001	Maize	plastid	97.72	97.72
TraesCS5D01G117600.1	Wheat	plastid	87.91	89.57
TraesCS5A01G106200.2	Wheat	plastid	87.91	89.57
TraesCS5B01G111200.1	Wheat	golgi, plastid	87.77	89.42
HORVU5Hr1G032650.1	Barley	plastid	87.34	88.73
Os12t0244100-01	Rice	plastid	87.34	87.97
CDY08914	Canola	cytosol	77.24	87.44
CDY24832	Canola	cytosol	77.52	87.2
CDY11007	Canola	cytosol	76.81	86.82
CDY34275	Canola	cytosol	76.53	86.08
Bra002461.1-P	Field mustard	cytosol	64.86	85.88
Zm00001d013507_P001	Maize	plastid	82.22	84.63
Zm00001d033591_P001	Maize	plastid	81.93	84.33
CDX92631	Canola	plastid	81.22	80.65
Bra010498.1-P	Field mustard	plastid	81.93	80.33
Bra019231.1-P	Field mustard	plastid	81.08	80.28
Bra013786.1-P	Field mustard	plastid	80.94	80.03
CDY03462	Canola	plastid	80.8	79.78
AT4G24280.1	Thale cress	plastid	80.65	78.97
AT5G49910.1	Thale cress	plastid	80.51	78.83
CDY03461	Canola	plastid	74.4	73.56
CDY03459	Canola	cytosol	61.45	65.26
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	50.5	52.36
Zm00001d013842_P003	Maize	mitochondrion	50.5	52.36
Zm00001d006036_P001	Maize	mitochondrion	49.22	50.81
Zm00001d014993_P001	Maize	endoplasmic reticulum	44.52	47.21
Zm00001d054043_P007	Maize	endoplasmic reticulum	44.38	47.06
Zm00001d041550_P005	Maize	cytosol	43.24	46.84
Zm00001d012420_P001	Maize	plasma membrane	43.1	46.76
Zm00001d042922_P002	Maize	cytosol	42.96	46.6
Zm00001d030725_P003	Maize	plasma membrane	42.96	46.53
Zm00001d010529_P001	Maize	cytosol	42.67	46.23
Zm00001d047799_P002	Maize	cytosol, extracellular, plasma membrane, plastid	42.82	46.17
Zm00001d028630_P005	Maize	cytosol, extracellular, nucleus, plasma membrane, plastid	42.39	45.92
Zm00001d048687_P002	Maize	cytosol, extracellular, plasma membrane	32.86	44.85
Zm00001d028639_P001	Maize	cytosol	34.14	44.44

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	ProteinID:AQK40138.1
InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	UniProt:K7UCZ5
HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF211	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	TIGRFAMs:TIGR02350
UniParc:UPI00022094CE	EnsemblPlantsGene:Zm00001d023802	EnsemblPlants:Zm00001d023802_P001	EnsemblPlants:Zm00001d023802_T001	SEG:seg	:

Description

Heat shock 70 kDa protein 6 chloroplastic

Coordinates

chr10:+:22238725..22244066

Molecular Weight (calculated)

74674.6 Da

IEP (calculated)

4.820

GRAVY (calculated)

-0.257

Length

703 amino acids

Sequence
(BLAST)

001: MVSFTCSQVG ATAAGGASPF LGYRWRSGPG GATPSSSLFV GRRLAAVQMR APSRGARGGS ALRVTCEKVV GIDLGTTNSA VAAMEGGKPT VVTNAEGART
101: TPSVVAYTKT GERLVGQIAK RQAVVNPENT FFSVKRFIGR KMAEVDDEAK QVSYGVVKDE NGNVKLDCPA IGKQFAAEEI SAQVLRKLVD DASKFLNEKI
201: TKAVVTVPAY FNDSQRTATK DAGRIAGLEV LRIINEPTAA SLAYGFEKKN NETILVFDLG GGTFDVSVLE VGDGVFEVLS TSGDTHLGGD DFDKRIVDWL
301: ASNFKKDERI DLLKDKQALQ RLTEAAEKAK MELSTLTQAN ISLPFITATA DGPKHIEATL SRAKFEELCS DLIDRLKTPV NNALRDAKLS LSDLDEVILV
401: GGSTRIPAVQ ELVRKLTDKD PNVTVNPDEV VSLGAAVQGG VLAGDVKDVV LLDVTPLSLG LETLGGVMTK IIPRNTTLPT SKSEVFSTAA DGQTSVEINV
501: LQGEREFVRD NKSLGSFRLD GIPPAPRGVP QIEVKFDIDA NGILSVAAID KGTGKKQDIT ITGASTLPKD EVERMVEEAD KFAKEDKEKR DAIDTKNQAD
601: SVVYQTEKQL KELGDKVPAP VKEKVDVKLQ ELKDAISGGS TQSMKDAMAA LNQEVMQIGQ AMYNQPGASA AGPTPGAEAG PTPGTGPTQN DGDVIDADFT
701: DSN

Best Arabidopsis Sequence Match ( AT5G49910.1 )
(BLAST)

001: MASSAAQIHI LGGIGFPTSS SSSSTKNLDN KTNSIPRSVF FGNRTSPFTT PTSAFLRMGR RNNNASRYTV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN

Arabidopsis Description

HSP70-7Heat shock 70 kDa protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.