CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75683	Canola	mitochondrion	98.38	98.09
CDY49682	Canola	mitochondrion	95.29	95.15
CDX90397	Canola	mitochondrion	94.71	94.99
AT4G37910.1	Thale cress	mitochondrion	92.06	91.79
CDY56552	Canola	mitochondrion	79.56	79.44
CDX81132	Canola	mitochondrion	79.56	79.44
CDX85810	Canola	mitochondrion	79.12	79.12
CDY44807	Canola	mitochondrion	78.24	67.34
CDY11007	Canola	cytosol	48.53	53.05
CDY08914	Canola	cytosol	48.24	52.82
CDY34275	Canola	cytosol	48.53	52.8
CDY24832	Canola	cytosol	48.24	52.48
CDX67525	Canola	endoplasmic reticulum	41.76	49.22
CDX92631	Canola	plastid	51.18	49.15
CDY03462	Canola	plastid	51.03	48.74
CDY22648	Canola	cytosol	42.5	47.77
CDY13371	Canola	cytosol, endoplasmic reticulum	47.21	47.7
CDY63497	Canola	endoplasmic reticulum	44.85	47.51
CDY33359	Canola	cytosol	36.18	47.49
CDX77423	Canola	cytosol, endoplasmic reticulum	44.71	47.35
CDX79726	Canola	endoplasmic reticulum	44.71	47.35
CDY35063	Canola	cytosol	36.03	47.3
CDY03461	Canola	plastid	49.26	47.12
CDY46766	Canola	endoplasmic reticulum	44.41	47.04
CDY23972	Canola	endoplasmic reticulum	44.26	46.88
CDX84809	Canola	endoplasmic reticulum	44.26	46.88
CDY52661	Canola	cytosol	44.56	46.83
CDY00784	Canola	cytosol	44.71	46.77
CDX73815	Canola	cytosol	44.71	46.63
CDY50531	Canola	cytosol	44.41	46.46
CDY06347	Canola	endoplasmic reticulum	42.5	45.02
CDX83960	Canola	cytosol	42.94	44.92
CDX96825	Canola	cytosol	42.94	44.92
CDY03459	Canola	cytosol	42.94	44.11
CDY49668	Canola	cytosol	30.29	41.37
CDY40362	Canola	cytosol, mitochondrion	27.5	41.19
CDY49667	Canola	nucleus	1.62	14.67

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
GO:A0A078BYD0	EnsemblPlants:CDX69342	ProteinID:CDX69342	ProteinID:CDX69342.1	InterPro:Chaperone_DnaK	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00131187001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF333
SUPFAM:SSF100920	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI0004EF3EA7	SEG:seg	:

Description

BnaC01g01110D

Coordinates

chrLK031789:-:4271766..4274469

Molecular Weight (calculated)

72854.0 Da

IEP (calculated)

5.763

GRAVY (calculated)

-0.296

Length

680 amino acids

Sequence
(BLAST)

001: MASVAILRAF RRREVQTASV SAFRSIASNG KTNLIGKLGH LARPFCSRPI GNDVIGIDLG TTNSCVAVME GKTPRVIENA EGTRTTPSVF AINQKGELLV
101: GTPAKRQGVT NPTGTIFGSK RLIGRGYGDP QTQKEMKMVP YKIVKAPNGD AWVEANGQKF SPSQIGANIL TKMKETAESY LGKTITKAVV TVPAYFNDAQ
201: RQATKDAGKI AGLDVQRIIN EPTAAALSYG MNNKEGVIAV FDLGGGTFDV SILEISSGVF EVKATNGDTF LGGEDFDNTL LEYLVSEFKR SDNIDLTKDK
301: LALQRLREAA EKAKIELSST SQTEINLPFI TADASGAKHL NITLTRSKFE GLVGKLIERT RSPCQNCLKD AGVSIKEIDE VLLVGGMTRV PKVQDIVSEI
401: FGKSPCKGVN PDEAVAMGAA IQGGILRGDV KELLLLDVTP LSLGIETLGG IFTRLINRNT TIPTKKSQVF STAADNQMQV GIKVLQGERE MAADNKSLGE
501: FDLVGIPPAP RGMPQIEVTF DIDANGIVTV SAKDKATNKE QQITIRSSGG LSDDEINRMV KEAELNSHKD QERKQLIDLR NTADTTIYSV EKSLSEYREK
601: IPAEIASEIE TAVSDLRTAM AGEEIEDIKA KLEAANKAVS KIGEHMSKGS GSSGTSGGEG SSGTEQTPEA EFEEASGSKK

Best Arabidopsis Sequence Match ( AT4G37910.2 )
(BLAST)

001: MASVALLRSF RRREVQMASV SAFKSVSANG KNSMFGKLGY LARPFCSRPV GNDVIGIDLG TTNSCVSVME GKTARVIENA EGSRTTPSVV AMNQKGELLV
101: GTPAKRQAVT NPTNTIFGSK RLIGRRFDDP QTQKEMKMVP YKIVKAPNGD AWVEANGQKF SPSQIGANVL TKMKETAEAY LGKSINKAVV TVPAYFNDAQ
201: RQATKDAGKI AGLDVQRIIN EPTAAALSYG MNNKEGVIAV FDLGGGTFDV SILEISSGVF EVKATNGDTF LGGEDFDNTL LEYLVNEFKR SDNIDLTKDN
301: LALQRLREAA EKAKIELSST TQTEINLPFI TADASGAKHL NITLTRSKFE GLVGKLIERT RSPCQNCLKD AGVTIKEVDE VLLVGGMTRV PKVQEIVSEI
401: FGKSPCKGVN PDEAVAMGAA IQGGILRGDV KDLLLLDVVP LSLGIETLGA VFTKLIPRNT TIPTKKSQVF STAADNQMQV GIKVLQGERE MAADNKVLGE
501: FDLVGIPPAP RGMPQIEVTF DIDANGITTV SAKDKATGKE QNITIRSSGG LSDDEINRMV KEAELNAQKD QEKKQLIDLR NSADTTIYSV EKSLSEYREK
601: IPAEIASEIE TAVSDLRTAM AGEDVEDIKA KVEAANKAVS KIGEHMSKGS GSSGSDGSSG EGTSGTEQTP EAEFEEASGS RK

Arabidopsis Description

HSP70-9Heat shock 70 kDa protein 9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.