Factsheet for GSMUA_Achr4P19830_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P12480_001	Banana	mitochondrion	83.11	92.64
VIT_00s0415g00030.t01	Wine grape	mitochondrion	87.22	87.1
KRH21710	Soybean	endoplasmic reticulum	86.2	87.09
KRH10640	Soybean	nucleus	85.9	86.8
KRH42039	Soybean	mitochondrion	86.05	86.56
KRH49859	Soybean	endoplasmic reticulum, nucleus	85.9	86.41
PGSC0003DMT400027703	Potato	mitochondrion	84.29	84.79
Solyc01g106260.2.1	Tomato	plastid	82.67	84.03
Solyc01g106210.2.1	Tomato	plastid	83.99	83.99
PGSC0003DMT400008101	Potato	mitochondrion	82.53	83.38
AT5G09590.1	Thale cress	mitochondrion	81.64	81.52
CDY56552	Canola	mitochondrion	81.2	81.2
Bra028628.1-P	Field mustard	mitochondrion	81.06	81.18
CDX81132	Canola	mitochondrion	81.06	81.06
Bra006027.1-P	Field mustard	mitochondrion	80.91	80.91
CDX85810	Canola	mitochondrion	80.76	80.88
GSMUA_Achr6P36350_001	Banana	mitochondrion	61.23	78.83
CDY44807	Canola	mitochondrion	79.15	68.23
GSMUA_Achr6P28370_001	Banana	plastid	49.34	52.34
GSMUA_Achr9P07750_001	Banana	plastid	49.34	52.26
GSMUA_Achr6P15270_001	Banana	cytosol	33.63	50.11
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	44.05	49.92
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	44.05	49.18
GSMUA_Achr8P20830_001	Banana	cytosol, plasma membrane	45.96	48.3
GSMUA_Achr10P...	Banana	cytosol	33.63	47.51
GSMUA_Achr7P15160_001	Banana	cytosol	29.52	46.53
GSMUA_Achr4P11940_001	Banana	cytosol	47.58	44.88
GSMUA_Achr9P03960_001	Banana	cytosol	33.48	44.62
GSMUA_Achr5P04580_001	Banana	endoplasmic reticulum	33.48	42.14
GSMUA_Achr5P10770_001	Banana	cytosol	38.33	35.37
GSMUA_Achr6P12370_001	Banana	plastid	49.93	26.01

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr4G19830_001
EnsemblPlants:GSMUA_Achr4P19830_001	EnsemblPlants:GSMUA_Achr4T19830_001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	UniProt:M0SQE6	HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF333	SUPFAM:SSF100920
SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI0002963E95	SEG:seg	:	:

Description

Heat shock 70 kDa protein, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr4G19830_001]

Coordinates

chr4:+:20646622..20652602

Molecular Weight (calculated)

73425.1 Da

IEP (calculated)

7.408

GRAVY (calculated)

-0.211

Length

681 amino acids

Sequence
(BLAST)

001: MAASVMLRAL RRRDLSPPYL SSRLRSLSSN AIMPWGAPLG HKWSSLVRPF STKPAGNDII GIDLGTTNSC VAVMEGKNAK VIENSEGART TPSVVAFNQK
101: GELLVGTPAK RQAVTNPTNT LFGTKRLIGR RFDDPQTQKE MKMVPFKIVR APNGDAWVEA NGQQYSPSQI GAFVLTKMKE TAESYLGKSV SKAVITVPAY
201: FNDAQRQATK DAGKIAGLDV QRIINEPTAA ALAYGLNNKE GLIVVFDLGG GTFDVSILEI SNGVFEVKAT NGDTFLGGED FDNALVEFLV DEFKRTEAID
301: LSKDRLALQR LREAAEKAKI ELSSTSQTDI NLPFITADAS GAKHMNITLT RSKFETLVNH LIERTKNPCK SCLKDAGISS KDVDEVLLVG GMTRVPKVQE
401: IVSEIFGKSP SKGVNPDEAV AMGAAIQGGI LRGDVKELLL LDVTPLSLGI ETLGGIFTRL INRNTTIPTK KSQVFSTAAD NQTQVGVRVL QGEREMATDN
501: KLLGEFDLVG IPPAPRGMPQ IEVTFDIDAN GIVTVSAKDK ATGKEQQITI RSSGGLSDDE IEKMVKEAEL HAQKDQERKA LIDIKNSADT TIYSIEKSLG
601: EFRDKIPAEV ATEIESAVAD LRKEMAGDNI DNIKAKLDAA NKAVSKIGQH MAGSSGGSSS VGSCISWKHS KWCGLFLFCC C

Best Arabidopsis Sequence Match ( AT5G09590.1 )
(BLAST)

001: MATAALLRSI RRREVVSSPF SAYRCLSSSG KASLNSSYLG QNFRSFSRAF SSKPAGNDVI GIDLGTTNSC VAVMEGKNPK VIENAEGART TPSVVAFNTK
101: GELLVGTPAK RQAVTNPTNT VSGTKRLIGR KFDDPQTQKE MKMVPYKIVR APNGDAWVEA NGQQYSPSQI GAFILTKMKE TAEAYLGKSV TKAVVTVPAY
201: FNDAQRQATK DAGRIAGLDV ERIINEPTAA ALSYGMTNKE GLIAVFDLGG GTFDVSVLEI SNGVFEVKAT NGDTFLGGED FDNALLDFLV NEFKTTEGID
301: LAKDRLALQR LREAAEKAKI ELSSTSQTEI NLPFITADAS GAKHFNITLT RSRFETLVNH LIERTRDPCK NCLKDAGISA KEVDEVLLVG GMTRVPKVQS
401: IVAEIFGKSP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGVFTRL ITRNTTIPTK KSQVFSTAAD NQTQVGIRVL QGEREMATDN
501: KLLGEFDLVG IPPSPRGVPQ IEVTFDIDAN GIVTVSAKDK TTGKVQQITI RSSGGLSEDD IQKMVREAEL HAQKDKERKE LIDTKNTADT TIYSIEKSLG
601: EYREKIPSEI AKEIEDAVAD LRSASSGDDL NEIKAKIEAA NKAVSKIGEH MSGGSGGGSA PGGGSEGGSD QAPEAEYEEV KK

Arabidopsis Description

HSP70-10Heat shock 70 kDa protein 10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.