Factsheet for VIT_17s0000g03310.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

extracellular: 23391302

msms PMID: 23391302 doi

B Delaunois, T Colby, N Belloy, A Conreux, A Harzen, F Baillieul, C Clément, J Schmidt, P Jeandet, S Cordelier

Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06058	Soybean	mitochondrion	88.97	91.29
Solyc01g103450.2.1	Tomato	plastid	89.82	90.33
PGSC0003DMT400064031	Potato	cytosol, plastid	90.1	90.23
CDY08914	Canola	cytosol	79.07	90.02
CDY24832	Canola	cytosol	79.49	89.92
CDY34275	Canola	cytosol	79.07	89.44
CDY11007	Canola	cytosol	78.64	89.39
Bra002461.1-P	Field mustard	cytosol	66.34	88.32
VIT_18s0041g01230.t01	Wine grape	plastid	85.01	87.1
AT4G24280.1	Thale cress	plastid	87.41	86.07
Bra010498.1-P	Field mustard	plastid	86.7	85.5
CDX92631	Canola	plastid	85.43	85.31
Bra019231.1-P	Field mustard	plastid	85.57	85.21
CDY03462	Canola	plastid	85.71	85.11
Bra013786.1-P	Field mustard	plastid	85.57	85.09
AT5G49910.1	Thale cress	plastid	86.14	84.82
CDY03461	Canola	plastid	78.78	78.34
CDY03459	Canola	cytosol	65.35	69.79
VIT_03s0097g00530.t01	Wine grape	mitochondrion	49.36	51.4
VIT_00s0415g00030.t01	Wine grape	mitochondrion	49.51	51.32
VIT_08s0007g00130.t01	Wine grape	cytosol	43.99	47.92
VIT_13s0019g01430.t01	Wine grape	cytosol	43.56	47.38
VIT_06s0004g04510.t01	Wine grape	cytosol, extracellular	43.42	47.38
VIT_06s0004g04470.t01	Wine grape	cytosol	43.56	47.24
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	44.41	47.08
VIT_14s0060g02340.t01	Wine grape	endoplasmic reticulum	43.14	47.0
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	43.42	46.03
VIT_11s0037g00510.t01	Wine grape	cytosol	42.29	45.58
VIT_13s0019g00930.t01	Wine grape	cytosol	40.03	42.62

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100249184	wikigene:100249184	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40
Gene3D:3.90.640.10	EMBL:AM456570	ProteinID:CAN81065	ProteinID:CAN81065.1	ProteinID:CCB43236	ProteinID:CCB43236.1
InterPro:Chaperone_DnaK	ncoils:Coil	UniProt:F6GTP0	EMBL:FN594950	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	EntrezGene:LOC100249184	wikigene:LOC100249184	HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF332	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	TIGR:TC54161	TIGRFAMs:TIGR02350	UniParc:UPI0001984F86	ArrayExpress:VIT_17s0000g03310
EnsemblPlantsGene:VIT_17s0000g03310	EnsemblPlants:VIT_17s0000g03310.t01	unigene:Vvi.2869	RefSeq:XP_002279101	RefSeq:XP_002279101.1	SEG:seg

Description

No Description!

Coordinates

chr17:+:3189808..3194355

Molecular Weight (calculated)

75638.6 Da

IEP (calculated)

5.062

GRAVY (calculated)

-0.326

Length

707 amino acids

Sequence
(BLAST)

001: MASSTAQIHG LGTTGFASSS AKPKRTSSRT VFFGQRLSPS TASFGLPKTA FLKLKRNSRR DYSTGPVRVV NEKVVGIDLG TTNSAVAAME GGKPTIVTNA
101: EGQRTTPSVV AYTKNGDRLV GQIAKRQAVV NPENTFFSVK RFIGRKMSEV DEESKQVSYR VVRDENGNVK LECPAIGKQF AAEEISAQVL RKLVDDASKF
201: LNDKVTKAVV TVPAYFNDSQ RTATKDAGRI AGLEVLRIIN EPTAASLAYG FEKKNNETIL VFDLGGGTFD VSVLEVGDGV FEVLSTSGDT HLGGDDFDKR
301: VVDWLAASFK KDEGIDLLKD KQALQRLTET AEKAKMELSS LTQTNISLPF ITATADGPKH IETTLTRAKF EELCSDLLDR LKTPVENSLR DAKLSFKDLD
401: EVILVGGSTR IPAVQELVKK MTGKDPNVTV NPDEVVALGA AVQAGVLSGD VSDIVLLDVS PLSLGLETLG GVMTKIIPRN TTLPTSKSEV FSTAADGQTS
501: VEINVLQGER EFVRDNKSLG SFRLDGIPPA PRGVPQIEVK FDIDANGILS VTAIDKGTGK KQDITITGAS TLPTDEVERM VSEAERFAKE DKEKRDAIDT
601: KNQADSVVYQ TEKQLKELGD KVPAQVKEKV EAKLGELKDA ISGGSTQVMK DAMAALNQEV MQLGQSLYNQ PGAPGAGPAP GSEAGPSESS GKGPDGDVID
701: ADFTDSK

Best Arabidopsis Sequence Match ( AT5G49910.1 )
(BLAST)

001: MASSAAQIHI LGGIGFPTSS SSSSTKNLDN KTNSIPRSVF FGNRTSPFTT PTSAFLRMGR RNNNASRYTV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN

Arabidopsis Description

HSP70-7Heat shock 70 kDa protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.