Factsheet for VIT_13s0019g00930.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g04510.t01	Wine grape	cytosol, extracellular	80.57	82.56
VIT_08s0007g00130.t01	Wine grape	cytosol	80.42	82.28
VIT_13s0019g01430.t01	Wine grape	cytosol	79.52	81.23
VIT_06s0004g04470.t01	Wine grape	cytosol	79.37	80.83
VIT_11s0037g00510.t01	Wine grape	cytosol	74.55	75.46
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	57.68	57.42
VIT_14s0060g02340.t01	Wine grape	endoplasmic reticulum	55.87	57.16
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	57.08	56.82
VIT_00s0415g00030.t01	Wine grape	mitochondrion	45.63	44.43
VIT_03s0097g00530.t01	Wine grape	mitochondrion	45.18	44.18
VIT_18s0041g01230.t01	Wine grape	plastid	43.37	41.74
VIT_17s0000g03310.t01	Wine grape	extracellular, plastid	42.62	40.03

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100261526	wikigene:100261526	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30
Gene3D:3.30.420.40	Gene3D:3.90.640.10	EMBL:AM426130	ProteinID:CAN66715	ProteinID:CAN66715.1	ProteinID:CCB56360
ProteinID:CCB56360.1	ncoils:Coil	UniProt:F6HN72	EMBL:FN595998	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	EntrezGene:LOC100261526	wikigene:LOC100261526	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF325	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI0002108275	ArrayExpress:VIT_13s0019g00930	EnsemblPlantsGene:VIT_13s0019g00930	EnsemblPlants:VIT_13s0019g00930.t01
RefSeq:XP_002279097	RefSeq:XP_002279097.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr13:+:2720364..2723716

Molecular Weight (calculated)

72681.5 Da

IEP (calculated)

4.901

GRAVY (calculated)

-0.294

Length

664 amino acids

Sequence
(BLAST)

001: MAGNGGAPVI GIDLGTTFSC VGVWQYDHVE IIANDQGNRT TPSYVAFTNT ERLIGDAAKN QVAMNPVNTV FAYSVALRFG VSMFITDAKR LIGRRFSDAS
101: IQDDIKLWPF KVIGGIGDKP TIVVTYKEEE KKFTAQEISS MVLSKMREIA EVYLGSTVDK AVVTVPAYFS DSQRQATKDA GAIAGLDVVR IINEPTAAAI
201: AYGLDKKGGG GGEKNVLIFD LGGGTFDVSL LTIEEGLFEV RATAGDTHLG GDDFDNRMVN YFVQEFKRKH KMDISGNPRA LERLRTACER AKRTLSSTAQ
301: TSIEIDSLYE GVDFYTTITR ARFEDLNMNL FRKCMEPVDK CLRDSKIGKS SVQDVVLVGG STRIPKVQQM LQDFFNGKEL CKSINPDEAV AYGAAVQGAI
401: LSGEGNKKVQ DLLLLDVTPL SLGLETAGGV MTVLIPRNTT IPTKKEQDFS TYSDNQTSVL IQVYEGERTR SRDNNLLGKF ELSGFAAAPR GVPKITVCFD
501: IDSNGILNVS AEEQTTGQKN KITITNDKGR LSKEDIEKMM QEAEKYKSED EMLKKKVEAK NALENYAYNV RSTVKDKKNE DKIAPLEKKK IEDAVEEVIQ
601: WLDSSQFAGA DEFEDKLKKF EAISKPIIGN IYEDTVHQVA DGVLAAGGPP PAASAAVPVV EEVD

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.