Factsheet for TraesCS2B01G125400.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G331400.1	Wheat	endoplasmic reticulum	51.29	51.36
TraesCS7B01G330900.1	Wheat	endoplasmic reticulum	51.74	51.35
TraesCS5B01G298000.1	Wheat	endoplasmic reticulum, nucleus, unclear	51.29	50.75
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	48.41	48.12
TraesCS4B01G205700.1	Wheat	cytosol, golgi	41.75	42.01
TraesCS1B01G294300.1	Wheat	cytosol, golgi, unclear	41.15	41.98
TraesCS5B01G492500.1	Wheat	cytosol	40.85	41.67
TraesCS4B01G206700.1	Wheat	cytosol	40.7	41.32
TraesCS2B01G374700.1	Wheat	cytosol	39.94	40.8
TraesCS6B01G367800.1	Wheat	golgi, plastid	39.94	40.8
TraesCS5B01G087700.4	Wheat	cytosol	39.94	40.8
TraesCS3B01G390700.1	Wheat	cytosol	39.94	40.49
TraesCS5B01G129700.2	Wheat	cytosol	37.82	40.26
TraesCS6B01G374500.1	Wheat	cytosol	28.14	40.17
TraesCS3B01G390800.1	Wheat	cytosol	37.67	40.16
TraesCS6B01G374600.1	Wheat	cytosol	30.71	39.65
TraesCS4B01G142400.1	Wheat	cytosol	39.94	39.46
TraesCS4B01G206400.1	Wheat	cytosol	34.8	39.12
TraesCS6B01G374400.1	Wheat	cytosol	31.92	38.22
TraesCS3B01G296300.1	Wheat	cytosol	29.5	37.86
TraesCS2B01G535000.2	Wheat	cytosol	28.59	35.39
TraesCS4B01G206300.1	Wheat	cytosol	33.28	34.48
TraesCS1B01G151300.1	Wheat	plastid	34.95	33.67
TraesCS5B01G111200.1	Wheat	golgi, plastid	34.04	32.61
TraesCS4B01G397600.1	Wheat	mitochondrion	33.13	32.35
TraesCS3B01G331400.4	Wheat	mitochondrion	33.43	32.31
TraesCS5B01G267900.1	Wheat	peroxisome	32.83	26.96

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	ncoils:Coil
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF317	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G125400	EnsemblPlants:TraesCS2B01G125400.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:93704869..93707052

Molecular Weight (calculated)

72764.8 Da

IEP (calculated)

4.589

GRAVY (calculated)

-0.342

Length

661 amino acids

Sequence
(BLAST)

001: MARRAAEALL VLGFLFLPLT ASSFLVPESR RRSGETGDEV LGIALGATHS CIAAVHRDGS IEIVPDDRGN RVTPAWVAFI DDGERLVGEA ARDQYAANPN
101: RTIYGARRIL GRRFSDADLQ QDVETLPYAV VDRDGMPYVR VDVGEDDVRL LSPVEITAAV FADMMDRAAA HLGRKVTRAV LTVPAHYTDA QMYATKEAGI
201: LAGLDVLRLV RDPVAAAIAN GLDKHRGDPR NMLVFDLGGS TLDVAVLTLD EGVFETMASR SDAHLGGDDF DRRLAGYFAE LFQRKHGRDV TGDGHAMQRL
301: LRECERAKRA LSDHDQHQVG VEVKALLDGV DLSETLTREL FEELNQDLFL KTMAPLNKAM EDAELEKGDI HDVILVGGGS RIPMVQQLVK DYFDGKEPVN
401: VDGINPDEAV AYGAAVQGSH LTGHHDDDDK VFFGIVDVPQ PAIGIEAADG AMVKLIRRDA GYPAKGTHVI TTYWDKRTTM AVKVYEGDRT EVKDNRLLCQ
501: LDLSEIPPAS IWNWGRRDIE VTIEVDQAGT IHAEATDKAS GKSANTSYGY HHRRLSQEEI DAMMREADEF ARDAKARLEA YVHSIKETLA AAGDMELEEK
601: RRGEVEGEVM AVSKWLDGNT ENAEEGDYEK KLWELQGICD PVISAMQTRL GGGLDDYEDE L

Best Arabidopsis Sequence Match ( AT1G09080.1 )
(BLAST)

001: MIFIKENTAK MTRNKAIACL VFLTVLDFLM NIGAALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA
101: AKNQAAKNPE RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ
201: RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK
301: DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD
401: GKEPSKGTNP DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE
501: LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD
601: KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL

Arabidopsis Description

MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.