Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g010240.1.1 | Tomato | cytosol, nucleus | 96.8 | 96.8 |
| VIT_07s0191g00140.t01 | Wine grape | cytosol | 68.18 | 66.83 |
| VIT_00s2531g00010.t01 | Wine grape | cytosol, extracellular | 17.85 | 63.1 |
| AT4G40050.1 | Thale cress | cytosol | 61.62 | 61.1 |
| KRH59293 | Soybean | cytosol | 61.62 | 60.6 |
| Bra011810.1-P | Field mustard | cytosol | 60.77 | 60.47 |
| KRH43143 | Soybean | cytosol | 61.45 | 60.43 |
| CDX69358 | Canola | cytosol | 46.46 | 60.26 |
| CDX75699 | Canola | cytosol | 61.28 | 59.38 |
| CDX69359 | Canola | nucleus | 10.1 | 50.85 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400041659 | EnsemblPlantsGene:PGSC0003DMG400016150 | EntrezGene:102587300 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:1903507 |
| InterPro:SCAI | PANTHER:PTHR21243 | PANTHER:PTHR21243:SF13 | PFAM:PF12070 | PGSC:PGSC0003DMG400016150 | RefSeq:XP_006353203.1 |
| SEG:seg | UniParc:UPI000296F677 | UniProt:M1BBQ9 | MapMan:35.2 | : | : |
Description
Signal transducer [Source:PGSC_GENE;Acc:PGSC0003DMG400016150]
Coordinates
chr11:+:2661573..2668812
Molecular Weight (calculated)
67629.2 Da
IEP (calculated)
8.297
GRAVY (calculated)
-0.190
Length
594 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDVVPKTF RALVESAEKK YARVRDLPAY GRWGTSNHYF HKVFKAYMRL WKYQQENRVR LLECGLQRWE IGEIASRIGQ LYFSQYMRTS EARFLLESCI
101: FYEAILNRKY FEGSGKDRMV RFKELRFYAR FLMVSLILNR TEMVNLLVEQ FKAIVDDSKA AFPGTNFKEW RLVVQEIVRF ARVHSPSPDA RPLRYCALFD
201: SHPSSRPYVA RFHAKKVLKF RDALLTSYHK NEAKFAELTL DTYRMLQCLE WEPSGSFYQR SPVEPRVNGA VIDQSITSGL IDINLAAEMM DPALPPNPKK
301: AVLYRPNVPL LISVVATMCE ELPPESVVLI YISASGNTIQ STTSHTESSS SSRKSSKNSV LSRTSYEQKS ALHENYTNTN GDTGQYFENC LCLGPSRSGG
401: SNNLYPGDLI PFTRRPLFLI IDSDNSDAFK VLHGAERGEK SALFLSPLRP SFKNPGTDVT QTGSQFTLFL AAPLQAFCQL VDLVSSDKDL DCSDEADGII
501: STAFAEWEVI LCTLTNLDLV WAQVLSDPFL RRLVLRFIFC RAVLGLFCLH ERGDEYLPVC LPKLPDTFSP DSETVLPSIR RLARLLKVGD CFRF
101: FYEAILNRKY FEGSGKDRMV RFKELRFYAR FLMVSLILNR TEMVNLLVEQ FKAIVDDSKA AFPGTNFKEW RLVVQEIVRF ARVHSPSPDA RPLRYCALFD
201: SHPSSRPYVA RFHAKKVLKF RDALLTSYHK NEAKFAELTL DTYRMLQCLE WEPSGSFYQR SPVEPRVNGA VIDQSITSGL IDINLAAEMM DPALPPNPKK
301: AVLYRPNVPL LISVVATMCE ELPPESVVLI YISASGNTIQ STTSHTESSS SSRKSSKNSV LSRTSYEQKS ALHENYTNTN GDTGQYFENC LCLGPSRSGG
401: SNNLYPGDLI PFTRRPLFLI IDSDNSDAFK VLHGAERGEK SALFLSPLRP SFKNPGTDVT QTGSQFTLFL AAPLQAFCQL VDLVSSDKDL DCSDEADGII
501: STAFAEWEVI LCTLTNLDLV WAQVLSDPFL RRLVLRFIFC RAVLGLFCLH ERGDEYLPVC LPKLPDTFSP DSETVLPSIR RLARLLKVGD CFRF
001: MAGEDVSSNF RALVENADRK FARVRDLPAF GRAQSHYFQK VFKAYMKLWN YQQSHRSKLV ESGLNRWEIG EIASRIGQLY FSQYMRTSEA RFLLEAFVFY
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:Q94BN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.