Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69359 | Canola | nucleus | 19.6 | 99.15 |
| CDX75699 | Canola | cytosol | 99.67 | 97.06 |
| AT4G40050.1 | Thale cress | cytosol | 86.93 | 86.64 |
| VIT_07s0191g00140.t01 | Wine grape | cytosol | 63.48 | 62.54 |
| KRH59293 | Soybean | cytosol | 62.65 | 61.92 |
| KRH43143 | Soybean | cytosol | 61.64 | 60.93 |
| PGSC0003DMT400041659 | Potato | cytosol | 60.47 | 60.77 |
| Solyc11g010240.1.1 | Tomato | cytosol, nucleus | 60.3 | 60.61 |
| VIT_00s2531g00010.t01 | Wine grape | cytosol, extracellular | 16.92 | 60.12 |
| Bra001083.1-P | Field mustard | cytosol, extracellular, peroxisome | 45.39 | 44.79 |
Protein Annotations
| MapMan:35.2 | EnsemblPlantsGene:Bra011810 | EnsemblPlants:Bra011810.1 | EnsemblPlants:Bra011810.1-P | GO:GO:0003674 | GO:GO:0003714 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:1903507 | InterPro:IPR016137 | UniProt:M4D5Q3 | PFAM:PF12070 | PIRSF:PIRSF013022 | PFscan:PS50132 |
| PANTHER:PTHR21243 | PANTHER:PTHR21243:SF13 | InterPro:RGS | InterPro:SCAI | InterPro:SCAI_metazoan/Viridiplantae | UniParc:UPI0002546240 |
| SEG:seg | : | : | : | : | : |
Description
AT4G40050 (E=4e-294) | signal transducer
Coordinates
chrA01:-:409204..411674
Molecular Weight (calculated)
68088.3 Da
IEP (calculated)
8.341
GRAVY (calculated)
-0.319
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEDVSRNF RALVENADRK FARVRDLPAF GRAQSHYFHK VFKAYMKLWN YQQSHRPKLV ASGLNRWEIG EIASRIGQLY FSQYMRTSEA RFLLESYVFY
101: EAILKRRYFE EGEERKDLSA RSKELRFYAR FLLVALIVDR REMVLHLAEK LRALVDDSKS NFRETNFKEW RIVVQEITRF TKADVDLTYV RPLRYCAMLD
201: SYPASHTYLA RFHAKKLFKF RDALLASYHR NEVKYAEVTL DTYRMMQCLE WEPSGSFYQK RPVETKENGF VVDHTLTSGI IDMKLAADMA DPSLPPNPRK
301: AVLYRPTVSH LLAVLAMICD ELSPECVMLI YLSASGGPAA RENVAQPENA VGSSRTSKSK LLGRASQEQK SYKSEPLSNG HKSSGGYYDD YLWLGPRGGS
401: GSNNLYPGDL IPFTRKPLFL VIDSDTSRAF KAERGEPVAL LLSPLKPSLE NPSADDTAAA LNGSQFTFFL TAPLQAFCQM LGLSNSDPEP EVYDEAESIL
501: SASFSEWETI LLTSKVLNLV WAQVLPDQFL RRLILRFIFC RSVLTCLSRT EDDDPYLPQC HPSLPDSLSP VSKTVQSTVE RLADHLGVAK SFHFSKT
101: EAILKRRYFE EGEERKDLSA RSKELRFYAR FLLVALIVDR REMVLHLAEK LRALVDDSKS NFRETNFKEW RIVVQEITRF TKADVDLTYV RPLRYCAMLD
201: SYPASHTYLA RFHAKKLFKF RDALLASYHR NEVKYAEVTL DTYRMMQCLE WEPSGSFYQK RPVETKENGF VVDHTLTSGI IDMKLAADMA DPSLPPNPRK
301: AVLYRPTVSH LLAVLAMICD ELSPECVMLI YLSASGGPAA RENVAQPENA VGSSRTSKSK LLGRASQEQK SYKSEPLSNG HKSSGGYYDD YLWLGPRGGS
401: GSNNLYPGDL IPFTRKPLFL VIDSDTSRAF KAERGEPVAL LLSPLKPSLE NPSADDTAAA LNGSQFTFFL TAPLQAFCQM LGLSNSDPEP EVYDEAESIL
501: SASFSEWETI LLTSKVLNLV WAQVLPDQFL RRLILRFIFC RSVLTCLSRT EDDDPYLPQC HPSLPDSLSP VSKTVQSTVE RLADHLGVAK SFHFSKT
001: MAGEDVSSNF RALVENADRK FARVRDLPAF GRAQSHYFQK VFKAYMKLWN YQQSHRSKLV ESGLNRWEIG EIASRIGQLY FSQYMRTSEA RFLLEAFVFY
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:Q94BN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.