Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43143 | Soybean | cytosol | 95.86 | 95.86 |
| VIT_07s0191g00140.t01 | Wine grape | cytosol | 68.54 | 68.32 |
| VIT_00s2531g00010.t01 | Wine grape | cytosol, extracellular | 18.71 | 67.26 |
| Bra011810.1-P | Field mustard | cytosol | 61.92 | 62.65 |
| CDX69358 | Canola | cytosol | 47.02 | 62.01 |
| Solyc11g010240.1.1 | Tomato | cytosol, nucleus | 60.76 | 61.78 |
| AT4G40050.1 | Thale cress | cytosol | 61.26 | 61.77 |
| PGSC0003DMT400041659 | Potato | cytosol | 60.6 | 61.62 |
| CDX75699 | Canola | cytosol | 62.25 | 61.34 |
| CDX69359 | Canola | nucleus | 10.1 | 51.69 |
| KRH48973 | Soybean | cytosol | 45.7 | 47.5 |
| KRH66307 | Soybean | cytosol | 45.86 | 47.43 |
Protein Annotations
| EntrezGene:100788132 | MapMan:35.2 | EMBL:ACUP02003315 | EnsemblPlantsGene:GLYMA_05G175900 | GO:GO:0003674 | GO:GO:0003714 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:1903507 | UniProt:I1K4H1 |
| EnsemblPlants:KRH59293 | ProteinID:KRH59293 | ProteinID:KRH59293.1 | PFAM:PF12070 | PANTHER:PTHR21243 | PANTHER:PTHR21243:SF13 |
| InterPro:SCAI | UniParc:UPI0002339E0E | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:36499187..36505235
Molecular Weight (calculated)
68809.9 Da
IEP (calculated)
7.707
GRAVY (calculated)
-0.274
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEDANLALQ TFRALVESAD RKFGRVRDVP AYGGGASQQQ QQHHAFQKVF KAYTRLWKYQ QENRAKLVEC GMKRWEIGEI ASRIGQLYFG QYMRSSECRF
101: LVEAYVFYEA ILSRRYFQGS EPNAKDLGVR SKELRFYARF LLVSVILNRT EMVKHLVERF GALVEDCRTT FRETNFKEWR QVVTEINRFT KVDKGFSFRP
201: MRYCATFDTH RASLPYVARF HAKRVLKFQD ALLTSYHRNE VKFAELTLDI YRMIQCLEWE PSGVFYQKHT VKPKENGDII DHSGASGIID MNLTADMTDP
301: TVPPNPRKAS LYRPSVTHVI AVLATICEEL PPDCVVLVYL SASGKAGLNN VSQVENFSGS SKYSRHKVLS QTSQGQNSEP SETQNNGKRE LSYYDNYLWF
401: GPKGNSGSNN LYPGDLIPFT RKPLFLIIDS DNSHAFKVLH GAERGETAAL FLSPLRPIFK NPSDVNSNNG SQFTFFLTAP LSAFCQMIGL SPNESDTDVY
501: NEAENIIANA LTEWEIILCS STTMDLVWAQ VISDPFLRRL ILRFIFCRSV ISFFCPPEES ELYLPLCLPH LPSSVAPTSE AVRSAVVQLA MHFDVADSFH
601: FTET
101: LVEAYVFYEA ILSRRYFQGS EPNAKDLGVR SKELRFYARF LLVSVILNRT EMVKHLVERF GALVEDCRTT FRETNFKEWR QVVTEINRFT KVDKGFSFRP
201: MRYCATFDTH RASLPYVARF HAKRVLKFQD ALLTSYHRNE VKFAELTLDI YRMIQCLEWE PSGVFYQKHT VKPKENGDII DHSGASGIID MNLTADMTDP
301: TVPPNPRKAS LYRPSVTHVI AVLATICEEL PPDCVVLVYL SASGKAGLNN VSQVENFSGS SKYSRHKVLS QTSQGQNSEP SETQNNGKRE LSYYDNYLWF
401: GPKGNSGSNN LYPGDLIPFT RKPLFLIIDS DNSHAFKVLH GAERGETAAL FLSPLRPIFK NPSDVNSNNG SQFTFFLTAP LSAFCQMIGL SPNESDTDVY
501: NEAENIIANA LTEWEIILCS STTMDLVWAQ VISDPFLRRL ILRFIFCRSV ISFFCPPEES ELYLPLCLPH LPSSVAPTSE AVRSAVVQLA MHFDVADSFH
601: FTET
001: MAGEDVSSNF RALVENADRK FARVRDLPAF GRAQSHYFQK VFKAYMKLWN YQQSHRSKLV ESGLNRWEIG EIASRIGQLY FSQYMRTSEA RFLLEAFVFY
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:Q94BN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.