Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s2531g00010.t01 | Wine grape | cytosol, extracellular | 27.56 | 99.4 |
| Solyc11g010240.1.1 | Tomato | cytosol, nucleus | 67.66 | 69.02 |
| KRH59293 | Soybean | cytosol | 68.32 | 68.54 |
| PGSC0003DMT400041659 | Potato | cytosol | 66.83 | 68.18 |
| KRH43143 | Soybean | cytosol | 67.16 | 67.38 |
| AT4G40050.1 | Thale cress | cytosol | 63.04 | 63.77 |
| Bra011810.1-P | Field mustard | cytosol | 62.54 | 63.48 |
| CDX69358 | Canola | cytosol | 47.03 | 62.23 |
| CDX75699 | Canola | cytosol | 62.87 | 62.15 |
| CDX69359 | Canola | nucleus | 10.89 | 55.93 |
| VIT_15s0045g01090.t01 | Wine grape | cytosol | 49.67 | 47.93 |
Protein Annotations
| EntrezGene:100248830 | wikigene:100248830 | MapMan:35.2 | ProteinID:CBI33144 | ProteinID:CBI33144.3 | UniProt:D7TRL9 |
| EMBL:FN596027 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:1903507 | EntrezGene:LOC100248830 | wikigene:LOC100248830 | PFAM:PF12070 | PANTHER:PTHR21243 |
| PANTHER:PTHR21243:SF13 | InterPro:SCAI | UniParc:UPI0001BE3D45 | ArrayExpress:VIT_07s0191g00140 | EnsemblPlantsGene:VIT_07s0191g00140 | EnsemblPlants:VIT_07s0191g00140.t01 |
| RefSeq:XP_002275725 | RefSeq:XP_002275725.2 | RefSeq:XP_003632475 | RefSeq:XP_003632475.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr7:-:14872976..14881586
Molecular Weight (calculated)
68681.3 Da
IEP (calculated)
7.438
GRAVY (calculated)
-0.183
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDNVVARTF RALVESADQK FARVRDVPTY GRGPNHYFQK VFKAYTRLWQ YQQENRLKLV EAGLQRWEIG EIASRIGQLY FGQYMRTSEA RFLLESYIFY
101: EAILNRGYFQ GSKGSMKDLG VRFKELRFYA RFLLVSLLLN RSEMVRVLVE RFRALVDDCK VTFRETKNNF REWTLVVQEI VRFMKVETAF MNVRPLRYCN
201: LFDSYPSSVP YVARFHAKKM LKFRDALLAS YHRNEVKFAE LTLDTYRMLQ CLEWEPSGSF YQKRQVELNE KLNENGALTD HSGTSGLIDI NLVVDMTDPT
301: LPPNPRKAIL YRPSVTHLIA VIATICEELP PDSVMLVYLS ASGKSGRGNI SQMENSGGTR KSSKVKVVSE ISHELDSSMP EAPVNNKGHS SDCHENFLCL
401: CPKGNGGSNN NLYPGDIIPF TRRPLFLIID SDNSHAFKDL HGAERGETAA LLLSPLKPAF KGPFGFDTTQ NGSQFTFFLT APLQAFYELV GLSFSDTDSD
501: AYNDADKILS TALSEWEVIL CTSTSLDLVW AQVLSDPFLR RLILRFIFCR CVLSLFCPPE DSEQYLPLCL PQLPSSVSPN SDAVQSAVLQ LANHLGVAEC
601: FSSNGL
101: EAILNRGYFQ GSKGSMKDLG VRFKELRFYA RFLLVSLLLN RSEMVRVLVE RFRALVDDCK VTFRETKNNF REWTLVVQEI VRFMKVETAF MNVRPLRYCN
201: LFDSYPSSVP YVARFHAKKM LKFRDALLAS YHRNEVKFAE LTLDTYRMLQ CLEWEPSGSF YQKRQVELNE KLNENGALTD HSGTSGLIDI NLVVDMTDPT
301: LPPNPRKAIL YRPSVTHLIA VIATICEELP PDSVMLVYLS ASGKSGRGNI SQMENSGGTR KSSKVKVVSE ISHELDSSMP EAPVNNKGHS SDCHENFLCL
401: CPKGNGGSNN NLYPGDIIPF TRRPLFLIID SDNSHAFKDL HGAERGETAA LLLSPLKPAF KGPFGFDTTQ NGSQFTFFLT APLQAFYELV GLSFSDTDSD
501: AYNDADKILS TALSEWEVIL CTSTSLDLVW AQVLSDPFLR RLILRFIFCR CVLSLFCPPE DSEQYLPLCL PQLPSSVSPN SDAVQSAVLQ LANHLGVAEC
601: FSSNGL
001: MAGEDVSSNF RALVENADRK FARVRDLPAF GRAQSHYFQK VFKAYMKLWN YQQSHRSKLV ESGLNRWEIG EIASRIGQLY FSQYMRTSEA RFLLEAFVFY
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:Q94BN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.