Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48973 | Soybean | cytosol | 59.08 | 63.86 |
| KRH66307 | Soybean | cytosol | 59.24 | 63.7 |
| Solyc01g081030.2.1 | Tomato | nucleus | 61.94 | 62.95 |
| AT3G03570.1 | Thale cress | cytosol, nucleus, peroxisome | 58.6 | 60.63 |
| CDX92045 | Canola | cytosol, nucleus, peroxisome | 58.28 | 60.5 |
| Bra001083.1-P | Field mustard | cytosol, extracellular, peroxisome | 58.12 | 60.33 |
| CDX74216 | Canola | cytosol, extracellular, peroxisome | 58.12 | 60.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.34 | 51.86 |
| VIT_07s0191g00140.t01 | Wine grape | cytosol | 47.93 | 49.67 |
| HORVU6Hr1G032750.1 | Barley | cytosol, nucleus | 25.96 | 47.25 |
| TraesCS5B01G209900.1 | Wheat | cytosol | 45.06 | 44.71 |
| Os09t0573200-01 | Rice | cytosol, nucleus, plastid | 43.79 | 44.64 |
| HORVU5Hr1G062040.1 | Barley | cytosol, peroxisome | 44.75 | 44.32 |
| TraesCS5A01G213800.2 | Wheat | cytosol | 44.43 | 44.15 |
| TraesCS5D01G218200.1 | Wheat | cytosol | 44.75 | 43.03 |
| EER99292 | Sorghum | cytosol | 42.99 | 42.99 |
| Zm00001d021467_P001 | Maize | cytosol | 42.83 | 40.45 |
| VIT_00s2531g00010.t01 | Wine grape | cytosol, extracellular | 10.19 | 38.1 |
Protein Annotations
| MapMan:35.2 | EMBL:AM427827 | ProteinID:CAN82230 | ProteinID:CAN82230.1 | ProteinID:CCB60782 | ProteinID:CCB60782.1 |
| UniProt:F6I1G5 | EMBL:FN596510 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:1903507 | PFAM:PF12070 | PANTHER:PTHR21243 | PANTHER:PTHR21243:SF13 |
| InterPro:SCAI | UniParc:UPI000210974A | ArrayExpress:VIT_15s0045g01090 | EnsemblPlantsGene:VIT_15s0045g01090 | EnsemblPlants:VIT_15s0045g01090.t01 | unigene:Vvi.25841 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr15:+:6367416..6401503
Molecular Weight (calculated)
71244.4 Da
IEP (calculated)
8.576
GRAVY (calculated)
-0.229
Length
628 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNNNNSSS SGHIPVSEVY WSLVDKADKK FSKIRDLPYY QRNRYDTYFY KVFKVYTQLW KFQQENRQKL VEAGLKRWEI GEIASRIAQL YFGQYMRTSE
101: AGYLSESYVF YEAILSREYF KEGLLQDLNL ANKQLRFFAR FMMVCLVLNR REMVHQLVSQ LKMLVDECKR TFQEADFKEW KLVVQEIVRF LKADTTFMNT
201: RPLRYSLVLD PSPDCLPQVS ISIGKRNLRL RDAILSSYHH NEVKFSELTL DTFRMLQCLE WEPSGSFYQS GGASLSGMGT KIGQNGSPGP SRINYSHDIT
301: DPTLPPNPRK AILYRPSITH FIAVLATICE ELPPDGVLLI YLSGSGRGRQ TIVPSYGAGT SLDTTENIVR SFQSHNIHSE ANSTSPFRSP SDSPNPSSGQ
401: SKEDCISCHS GCLHIGSRGN GGLNFIYPCD LIPFTRRPLF LVIDRYCLHG INGAEKGEPA ALLLSPSSLS PPVAAVDTSR HPTGSLFTIF LTAPLQAFCL
501: LLGFSGSDVE MDLYSKAEKL LSSSLNDWGL TLATSDTLDP AWAQILSDPF LRRILLRTKL HCGQCVVLQI VKQDFCQTFL YTYSYFVGQS LHYMLQHSTR
601: KNSFLNACPA FQWRSIQQLL HPRLWSCK
101: AGYLSESYVF YEAILSREYF KEGLLQDLNL ANKQLRFFAR FMMVCLVLNR REMVHQLVSQ LKMLVDECKR TFQEADFKEW KLVVQEIVRF LKADTTFMNT
201: RPLRYSLVLD PSPDCLPQVS ISIGKRNLRL RDAILSSYHH NEVKFSELTL DTFRMLQCLE WEPSGSFYQS GGASLSGMGT KIGQNGSPGP SRINYSHDIT
301: DPTLPPNPRK AILYRPSITH FIAVLATICE ELPPDGVLLI YLSGSGRGRQ TIVPSYGAGT SLDTTENIVR SFQSHNIHSE ANSTSPFRSP SDSPNPSSGQ
401: SKEDCISCHS GCLHIGSRGN GGLNFIYPCD LIPFTRRPLF LVIDRYCLHG INGAEKGEPA ALLLSPSSLS PPVAAVDTSR HPTGSLFTIF LTAPLQAFCL
501: LLGFSGSDVE MDLYSKAEKL LSSSLNDWGL TLATSDTLDP AWAQILSDPF LRRILLRTKL HCGQCVVLQI VKQDFCQTFL YTYSYFVGQS LHYMLQHSTR
601: KNSFLNACPA FQWRSIQQLL HPRLWSCK
001: MSQQISGNNN IPLSEVYWSL VNKADKKFSK IRDLPFYERS RYENYFFKVF KVYTQLWKFQ QENRQKLVEA GLKRWEIGEI ASRIAQLYYG HYMRTSDAGY
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:F4J153]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.