Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G209900.1 | Wheat | cytosol | 88.67 | 91.47 |
| TraesCS5A01G213800.2 | Wheat | cytosol | 88.36 | 91.3 |
| HORVU5Hr1G062040.1 | Barley | cytosol, peroxisome | 86.06 | 88.64 |
| HORVU6Hr1G032750.1 | Barley | cytosol, nucleus | 46.4 | 87.83 |
| Os09t0573200-01 | Rice | cytosol, nucleus, plastid | 74.43 | 78.9 |
| EER99292 | Sorghum | cytosol | 73.05 | 75.96 |
| Zm00001d021467_P001 | Maize | cytosol | 72.13 | 70.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.3 | 51.86 |
| KRH48973 | Soybean | cytosol | 43.49 | 48.88 |
| KRH66307 | Soybean | cytosol | 43.64 | 48.8 |
| CDX74216 | Canola | cytosol, extracellular, peroxisome | 43.34 | 46.78 |
| Bra001083.1-P | Field mustard | cytosol, extracellular, peroxisome | 43.34 | 46.78 |
| CDX92045 | Canola | cytosol, nucleus, peroxisome | 43.19 | 46.61 |
| Solyc01g081030.2.1 | Tomato | nucleus | 43.34 | 45.79 |
| AT3G03570.1 | Thale cress | cytosol, nucleus, peroxisome | 42.42 | 45.63 |
| VIT_15s0045g01090.t01 | Wine grape | cytosol | 43.03 | 44.75 |
| TraesCS5D01G256300.2 | Wheat | cytosol | 38.59 | 42.5 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G218200.1 | EnsemblPlantsGene:TraesCS5D01G218200 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:SCAI | InterPro:SCAI_metazoan/Viridiplantae | PANTHER:PTHR21243 |
| PANTHER:PTHR21243:SF13 | PFAM:PF12070 | PIRSF:PIRSF013022 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5D:+:327053177..327057196
Molecular Weight (calculated)
72448.3 Da
IEP (calculated)
6.776
GRAVY (calculated)
-0.259
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPVSSTTVQ GNSGGGERNA SGGATMASSP QQGQGQAQGG GGGGGGGVCP AEQFWSLLDK ADRRFARVRD LPLFGRQEPA EYGKAFRIYT QLWRMQQEHR
101: HRLLDAGLRR WQVGEIAARI AHLYYSQYQR TSDTALLSEA FVFYHAVLDR AYFLDDHLGA STKHLRFLAR FLLVALILSR RAQTVPRLAG HIRSLLDESK
201: KTLQEADYRE WKHVVQEITR FLKADSPFMN KRPLRYSYAF DPPPETLPTI PPTVKKRGLL LSDAILCSYY HNEVKFTDLT LDTFRMLQCL EWEPCGSFAQ
301: NNGYSAHDEG GQNHPNLLKD LRDAALPPNP LKTVLYRPSV PHFLKVLATK CEELPLNTMM LIYLSAADEV QSSGLGPDTS ERVVNSFSQF DISNTRAGTS
401: KEDNEPCLWL GCREGEGSNC IYPCDLIPFT RRPLFLVIDS NISYAFKSIH GAEKGETAAM LLSPSSRSCA VGFSGDSTRQ SGSQFTMFLT APLQAFCFLI
501: GNNGLDIIDK DYNKAEELLS LSLNEWAMTL VASSSLDPVW VEVLGDPLLR RLLLRFIFCR ATLSLFKASN DKAECLPSCV PPLPESVGGE SMLSQCCLMR
601: VASFLGAADQ FSFAEVTTWP DIDDPPAVEV PTKSYEEKIH RPSHGPISPG SRS
101: HRLLDAGLRR WQVGEIAARI AHLYYSQYQR TSDTALLSEA FVFYHAVLDR AYFLDDHLGA STKHLRFLAR FLLVALILSR RAQTVPRLAG HIRSLLDESK
201: KTLQEADYRE WKHVVQEITR FLKADSPFMN KRPLRYSYAF DPPPETLPTI PPTVKKRGLL LSDAILCSYY HNEVKFTDLT LDTFRMLQCL EWEPCGSFAQ
301: NNGYSAHDEG GQNHPNLLKD LRDAALPPNP LKTVLYRPSV PHFLKVLATK CEELPLNTMM LIYLSAADEV QSSGLGPDTS ERVVNSFSQF DISNTRAGTS
401: KEDNEPCLWL GCREGEGSNC IYPCDLIPFT RRPLFLVIDS NISYAFKSIH GAEKGETAAM LLSPSSRSCA VGFSGDSTRQ SGSQFTMFLT APLQAFCFLI
501: GNNGLDIIDK DYNKAEELLS LSLNEWAMTL VASSSLDPVW VEVLGDPLLR RLLLRFIFCR ATLSLFKASN DKAECLPSCV PPLPESVGGE SMLSQCCLMR
601: VASFLGAADQ FSFAEVTTWP DIDDPPAVEV PTKSYEEKIH RPSHGPISPG SRS
001: MSQQISGNNN IPLSEVYWSL VNKADKKFSK IRDLPFYERS RYENYFFKVF KVYTQLWKFQ QENRQKLVEA GLKRWEIGEI ASRIAQLYYG HYMRTSDAGY
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:F4J153]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.