Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021467_P001 | Maize | cytosol | 93.63 | 88.42 |
| Os09t0573200-01 | Rice | cytosol, nucleus, plastid | 79.78 | 81.33 |
| TraesCS5A01G213800.2 | Wheat | cytosol | 75.8 | 75.32 |
| HORVU5Hr1G062040.1 | Barley | cytosol, peroxisome | 75.8 | 75.08 |
| TraesCS5B01G209900.1 | Wheat | cytosol | 75.64 | 75.04 |
| HORVU6Hr1G032750.1 | Barley | cytosol, nucleus | 40.61 | 73.91 |
| TraesCS5D01G218200.1 | Wheat | cytosol | 75.96 | 73.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.18 | 51.7 |
| KRH66307 | Soybean | cytosol | 45.38 | 48.8 |
| KRH48973 | Soybean | cytosol | 45.06 | 48.71 |
| CDX92045 | Canola | cytosol, nucleus, peroxisome | 44.11 | 45.79 |
| CDX74216 | Canola | cytosol, extracellular, peroxisome | 44.11 | 45.79 |
| Bra001083.1-P | Field mustard | cytosol, extracellular, peroxisome | 44.11 | 45.79 |
| AT3G03570.1 | Thale cress | cytosol, nucleus, peroxisome | 43.63 | 45.14 |
| Solyc01g081030.2.1 | Tomato | nucleus | 44.27 | 44.98 |
| EER96902 | Sorghum | cytosol | 40.92 | 43.19 |
| VIT_15s0045g01090.t01 | Wine grape | cytosol | 42.99 | 42.99 |
Protein Annotations
| MapMan:35.2 | EntrezGene:8054996 | EntrezGene:8063339 | UniProt:C5X702 | ProteinID:EER99288.1 | EnsemblPlants:EER99292 |
| ProteinID:EER99292 | ProteinID:EER99292.2 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:1903507 | PFAM:PF12070 |
| PIRSF:PIRSF013022 | PANTHER:PTHR21243 | PANTHER:PTHR21243:SF15 | InterPro:SCAI | InterPro:SCAI_metazoan/Viridiplantae | EnsemblPlantsGene:SORBI_3002G283600 |
| unigene:Sbi.20890 | unigene:Sbi.7176 | UniParc:UPI0001A83E03 | RefSeq:XP_002462767.1 | RefSeq:XP_002462771.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:-:66466314..66475851
Molecular Weight (calculated)
70135.2 Da
IEP (calculated)
6.819
GRAVY (calculated)
-0.256
Length
628 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASPQQQGQ GGPGGGGGGW TPEQFWSLLD KADRRFARVR DLSPLGRQEP DAFAKAFRAY TQLWRMQQEH RHRLLEAGLR RWQVGEIAAR IAHLYYAQYQ
101: RTADTALLSE AFVFYHAVLD RAYFQDADHH LSPAKHLRFL ARFLLVALLL ARRSHTVPRL ASDIRTLLDD SKKSFQDAEY KEWKHVVQEI ARFLRADSPF
201: MNMRPLRYSY AFDPPPDTLR TVPPTVKKRG LVLSDTILCS YYPNEVKFTD LSIDVFRMVQ CLEWEPCGSF ALNNGYSAHD ESGQNQPNLL KDLRDAALPP
301: NPLKTILYRP SMTHFLTVLA TKCEELPSNG IMLIYLSATG EMGTSGFCPD TGEKVLSNFN KFDISSTSHI SSKENKEPCL WLGCRETEGS NCIYPGDLIP
401: FTRRPLFLVI DSSTSYAFKS IHGTERGETA AMLLSPSSRS SAAGFSGDST RNCGSQFTMF LTAPLQAFCF LIGNNGTDID RDAYNKAEEL LLLSLNEWAT
501: TLVASSSLHP VWVEVLGDPL LRRLLLRFIF CRATHSLFKP TNHKAEFLPT CMPPLPESVD AESMLSQSCV MRVASFFGAV SQFSFAEVTT WPDVDPEEAV
601: ATSSSGSANK GVPETARDSD ISNSSSSF
101: RTADTALLSE AFVFYHAVLD RAYFQDADHH LSPAKHLRFL ARFLLVALLL ARRSHTVPRL ASDIRTLLDD SKKSFQDAEY KEWKHVVQEI ARFLRADSPF
201: MNMRPLRYSY AFDPPPDTLR TVPPTVKKRG LVLSDTILCS YYPNEVKFTD LSIDVFRMVQ CLEWEPCGSF ALNNGYSAHD ESGQNQPNLL KDLRDAALPP
301: NPLKTILYRP SMTHFLTVLA TKCEELPSNG IMLIYLSATG EMGTSGFCPD TGEKVLSNFN KFDISSTSHI SSKENKEPCL WLGCRETEGS NCIYPGDLIP
401: FTRRPLFLVI DSSTSYAFKS IHGTERGETA AMLLSPSSRS SAAGFSGDST RNCGSQFTMF LTAPLQAFCF LIGNNGTDID RDAYNKAEEL LLLSLNEWAT
501: TLVASSSLHP VWVEVLGDPL LRRLLLRFIF CRATHSLFKP TNHKAEFLPT CMPPLPESVD AESMLSQSCV MRVASFFGAV SQFSFAEVTT WPDVDPEEAV
601: ATSSSGSANK GVPETARDSD ISNSSSSF
001: MSQQISGNNN IPLSEVYWSL VNKADKKFSK IRDLPFYERS RYENYFFKVF KVYTQLWKFQ QENRQKLVEA GLKRWEIGEI ASRIAQLYYG HYMRTSDAGY
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:F4J153]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.