Factsheet for HORVU6Hr1G032750.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G062040.1	Barley	cytosol, peroxisome	96.52	52.52
TraesCS5A01G213800.2	Wheat	cytosol	87.25	47.63
TraesCS5B01G209900.1	Wheat	cytosol	86.67	47.24
TraesCS5D01G218200.1	Wheat	cytosol	87.83	46.4
Os09t0573200-01	Rice	cytosol, nucleus, plastid	78.26	43.83
EER99292	Sorghum	cytosol	73.91	40.61
Zm00001d021467_P001	Maize	cytosol	74.2	38.5
GSMUA_AchrUn_...	Banana	cytosol	52.46	28.02
KRH48973	Soybean	cytosol	45.22	26.85
KRH66307	Soybean	cytosol	45.22	26.71
AT3G03570.1	Thale cress	cytosol, nucleus, peroxisome	46.09	26.19
CDX92045	Canola	cytosol, nucleus, peroxisome	45.8	26.12
VIT_15s0045g01090.t01	Wine grape	cytosol	47.25	25.96
CDX74216	Canola	cytosol, extracellular, peroxisome	45.51	25.95
Bra001083.1-P	Field mustard	cytosol, extracellular, peroxisome	45.51	25.95
Solyc01g081030.2.1	Tomato	nucleus	43.19	24.11
HORVU5Hr1G070270.8	Barley	plastid	41.16	23.43

Protein Annotations

EnsemblPlants:HORVU6Hr1G032750.1	EnsemblPlantsGene:HORVU6Hr1G032750	GO:GO:0003674	GO:GO:0003714	GO:GO:0006139	GO:GO:0006351
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:1903507	InterPro:SCAI
PANTHER:PTHR21243	PANTHER:PTHR21243:SF15	PFAM:PF12070	SEG:seg	UniParc:UPI000B487467	UniProt:A0A287TU71
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:144609071..144610595

Molecular Weight (calculated)

38979.5 Da

IEP (calculated)

9.211

GRAVY (calculated)

-0.419

Length

345 amino acids

Sequence
(BLAST)

001: GERNASGGAT MASSPQQGQG QVQGGGGGGG GGGVCPAEQF WSLLDKADRR FARVRDLPLF GRQEPAEYGK AFRIYTQLWR MQQEHRHRLL DAGLRRWQVG
101: EIAARIAHLY YSQYQRTSDT ALLSEAFVFY HAVLDRAYFL DDHLGASTKH LRFLARFLLV ALILGRRAQT VPRLAGQIRT LLDESKKTLQ EADYREWKHV
201: AQEITRFLKA DSPYMNMRPL RYSYAFDPPP ETLPSIPPTV KKRGLLLSDA ILCSYYHNEV KFTDLTLDTF RMLQCLEWEP CGSFAQNNGY SAHDESGQNH
301: PNLLKDLRDA ALPPNPLKTV LYRPSVPHFL TVSSVSHLAS CQLNV

Best Arabidopsis Sequence Match ( AT3G03570.1 )
(BLAST)

001: MSQQISGNNN IPLSEVYWSL VNKADKKFSK IRDLPFYERS RYENYFFKVF KVYTQLWKFQ QENRQKLVEA GLKRWEIGEI ASRIAQLYYG HYMRTSDAGY
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF

Arabidopsis Description

Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:F4J153]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.