Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G246800.3 | Wheat | cytosol | 86.3 | 88.34 |
| TraesCS5A01G249100.1 | Wheat | cytosol | 86.3 | 88.2 |
| TraesCS5D01G256300.2 | Wheat | cytosol | 86.3 | 88.2 |
| Os09t0470900-01 | Rice | cytosol | 75.91 | 77.31 |
| EER96902 | Sorghum | cytosol | 75.41 | 76.81 |
| Zm00001d020807_P003 | Maize | cytosol | 75.25 | 76.64 |
| Zm00001d005957_P001 | Maize | cytosol | 11.06 | 71.28 |
| GSMUA_Achr10P... | Banana | cytosol | 50.0 | 49.11 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.01 | 47.52 |
| GSMUA_Achr7P12730_001 | Banana | cytosol | 50.83 | 46.25 |
| HORVU6Hr1G032750.1 | Barley | cytosol, nucleus | 23.43 | 41.16 |
| HORVU5Hr1G062040.1 | Barley | cytosol, peroxisome | 39.93 | 38.17 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G070270.8 | EnsemblPlantsGene:HORVU5Hr1G070270 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:1903507 | InterPro:SCAI |
| PANTHER:PTHR21243 | PANTHER:PTHR21243:SF13 | PFAM:PF12070 | SEG:seg | UniParc:UPI000B47048B | UniProt:A0A287RPM9 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:527751764..527757368
Molecular Weight (calculated)
67425.0 Da
IEP (calculated)
9.501
GRAVY (calculated)
-0.329
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: PLFFTSSRTN CPFYHSLSPL SAPSPSHRVL RPFAARIQRT AGREGGTDRQ TDREGPSEPS PPAPRPPAMA DGEPSGAYRE FKALVEAADR KFARARDLPL
101: YGGGDHHSRK AFKAYTRLWR LQQDRRRDLV AAGLRRWEIG EVASRIGQLY YARYLRTAEP RSLVGAYVFY EAIYSRGYFA APAPANANAS AAAGGGAKHQ
201: GLLIRYKELR FIARFLVVAM LMRRAEAVDH LVARLRSLVQ ESKSAYPKTN FKEWKQVLQE LERFLKADGA YKGSRSLRYD NLFDSYASNL ASIARFHSKR
301: VLKLKEAVLT SYRRNEVKFT ELTLDTFRML QSLEWEPTGS YQIAVKELTE NGTMSDQSGP SGLIDIHLST EISDGNLPSN PQRAIIYHPT VSHLIAVLAT
401: ICEELSQDSI LLIYISASGF ADQNAYQKYG SSSSSRSRPA SAFSIDKPNS HSGSXDHVWL GPRGNGGPNN LYPEDLIPFT RYPLFLVVDS ENSHAFKAIH
501: NAEKGEPAAL LLSPRIASAM HGVESMGNAG QFTYFLTAPM QAFCQLAGIT SDIDSDTYAN AENILFSALE QYEEILSTSV GLNIVWGQIL PDPFLRRLIL
601: RFIFCR
101: YGGGDHHSRK AFKAYTRLWR LQQDRRRDLV AAGLRRWEIG EVASRIGQLY YARYLRTAEP RSLVGAYVFY EAIYSRGYFA APAPANANAS AAAGGGAKHQ
201: GLLIRYKELR FIARFLVVAM LMRRAEAVDH LVARLRSLVQ ESKSAYPKTN FKEWKQVLQE LERFLKADGA YKGSRSLRYD NLFDSYASNL ASIARFHSKR
301: VLKLKEAVLT SYRRNEVKFT ELTLDTFRML QSLEWEPTGS YQIAVKELTE NGTMSDQSGP SGLIDIHLST EISDGNLPSN PQRAIIYHPT VSHLIAVLAT
401: ICEELSQDSI LLIYISASGF ADQNAYQKYG SSSSSRSRPA SAFSIDKPNS HSGSXDHVWL GPRGNGGPNN LYPEDLIPFT RYPLFLVVDS ENSHAFKAIH
501: NAEKGEPAAL LLSPRIASAM HGVESMGNAG QFTYFLTAPM QAFCQLAGIT SDIDSDTYAN AENILFSALE QYEEILSTSV GLNIVWGQIL PDPFLRRLIL
601: RFIFCR
001: MAGEDVSSNF RALVENADRK FARVRDLPAF GRAQSHYFQK VFKAYMKLWN YQQSHRSKLV ESGLNRWEIG EIASRIGQLY FSQYMRTSEA RFLLEAFVFY
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:Q94BN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.