Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G032750.1 | Barley | cytosol, nucleus | 52.52 | 96.52 |
| TraesCS5A01G213800.2 | Wheat | cytosol | 89.59 | 89.87 |
| TraesCS5B01G209900.1 | Wheat | cytosol | 89.12 | 89.26 |
| TraesCS5D01G218200.1 | Wheat | cytosol | 88.64 | 86.06 |
| Os09t0573200-01 | Rice | cytosol, nucleus, plastid | 76.97 | 79.22 |
| EER99292 | Sorghum | cytosol | 75.08 | 75.8 |
| Zm00001d021467_P001 | Maize | cytosol | 73.97 | 70.53 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.37 | 51.39 |
| KRH48973 | Soybean | cytosol | 44.8 | 48.88 |
| KRH66307 | Soybean | cytosol | 44.95 | 48.8 |
| CDX92045 | Canola | cytosol, nucleus, peroxisome | 45.27 | 47.44 |
| CDX74216 | Canola | cytosol, extracellular, peroxisome | 45.11 | 47.27 |
| Bra001083.1-P | Field mustard | cytosol, extracellular, peroxisome | 45.11 | 47.27 |
| AT3G03570.1 | Thale cress | cytosol, nucleus, peroxisome | 44.8 | 46.79 |
| Solyc01g081030.2.1 | Tomato | nucleus | 44.01 | 45.15 |
| VIT_15s0045g01090.t01 | Wine grape | cytosol | 44.32 | 44.75 |
| HORVU5Hr1G070270.8 | Barley | plastid | 38.17 | 39.93 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G062040.1 | EnsemblPlantsGene:HORVU5Hr1G062040 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:1903507 | InterPro:SCAI |
| InterPro:SCAI_metazoan/Viridiplantae | PANTHER:PTHR21243 | PANTHER:PTHR21243:SF13 | PFAM:PF12070 | PIRSF:PIRSF013022 | SEG:seg |
| UniParc:UPI000B46B9D5 | UniProt:A0A287RGP7 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:483095832..483100212
Molecular Weight (calculated)
70155.5 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.232
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: PVSSTTVQGN SVGGERNASG GATMASSPQQ GQGQVQGGGG GGGGGGVCPA EQFWSLLDKA DRRFARVRDL PLFGRQEPAE YGKAFRIYTQ LWRMQQEHRH
101: RLLDAGLRRW QVGEIAARIA HLYYSQYQRT SDTALLSEAF VFYHAVLDRA YFLDDHLGAS TKHLRFLARF LLVALILGRR AQTVPRLAGQ IRTLLDESKK
201: TLQEADYREW KHVAQEITRF LKADSPYMNM RPLRYSYAFD PPPETLPSIP PTVKKRGLLL SDAILCSYYH NEVKFTDLTL DTFRMLQCLE WEPCGSFAQN
301: NGYSAHDESG QNHPNLLKDL RDAALPPNPL KTVLYRPSVP HFLTVLATKC EELPLNAMML IYLSASGEVG SSGLGPDTSE RVVNSFSKFD ISNTRAVTSK
401: EDNEPCLWLG CREGEGSNCI YPCDLIPFTR RPLFLVIDSN VSYAFKSIHG AEKGETAAML LSPSSRSCSA GFSGDSSRQS GSQFTMFLAA PLQAFCFLIG
501: NNRLDTDKDS YNKAEELLSL SLNEWAMTLV ASSSLDPVWV EVLGDPLLRR LLLRFIFCRA TLSLLKASND KVECLPSCVP PLPESVGGEN MLSQSCVMRV
601: ASFLGAIDQF SFAEVTTWPD IDEPTSSGGA DKEL
101: RLLDAGLRRW QVGEIAARIA HLYYSQYQRT SDTALLSEAF VFYHAVLDRA YFLDDHLGAS TKHLRFLARF LLVALILGRR AQTVPRLAGQ IRTLLDESKK
201: TLQEADYREW KHVAQEITRF LKADSPYMNM RPLRYSYAFD PPPETLPSIP PTVKKRGLLL SDAILCSYYH NEVKFTDLTL DTFRMLQCLE WEPCGSFAQN
301: NGYSAHDESG QNHPNLLKDL RDAALPPNPL KTVLYRPSVP HFLTVLATKC EELPLNAMML IYLSASGEVG SSGLGPDTSE RVVNSFSKFD ISNTRAVTSK
401: EDNEPCLWLG CREGEGSNCI YPCDLIPFTR RPLFLVIDSN VSYAFKSIHG AEKGETAAML LSPSSRSCSA GFSGDSSRQS GSQFTMFLAA PLQAFCFLIG
501: NNRLDTDKDS YNKAEELLSL SLNEWAMTLV ASSSLDPVWV EVLGDPLLRR LLLRFIFCRA TLSLLKASND KVECLPSCVP PLPESVGGEN MLSQSCVMRV
601: ASFLGAIDQF SFAEVTTWPD IDEPTSSGGA DKEL
001: MSQQISGNNN IPLSEVYWSL VNKADKKFSK IRDLPFYERS RYENYFFKVF KVYTQLWKFQ QENRQKLVEA GLKRWEIGEI ASRIAQLYYG HYMRTSDAGY
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:F4J153]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.