Factsheet for Bra001083.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 1
mitochondrion 1
extracellular 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74216	Canola	cytosol, extracellular, peroxisome	99.83	99.83
AT3G03570.1	Thale cress	cytosol, nucleus, peroxisome	86.78	86.49
KRH66307	Soybean	cytosol	60.83	63.01
KRH48973	Soybean	cytosol	60.17	62.65
Solyc01g081030.2.1	Tomato	nucleus	59.83	58.58
VIT_15s0045g01090.t01	Wine grape	cytosol	60.33	58.12
GSMUA_AchrUn_...	Banana	cytosol	54.55	51.08
HORVU6Hr1G032750.1	Barley	cytosol, nucleus	25.95	45.51
Bra011810.1-P	Field mustard	cytosol	44.79	45.39
TraesCS5A01G213800.2	Wheat	cytosol	47.27	45.25
HORVU5Hr1G062040.1	Barley	cytosol, peroxisome	47.27	45.11
Os09t0573200-01	Rice	cytosol, nucleus, plastid	45.79	44.97
TraesCS5B01G209900.1	Wheat	cytosol	46.94	44.87
EER99292	Sorghum	cytosol	45.79	44.11
TraesCS5D01G218200.1	Wheat	cytosol	46.78	43.34
Zm00001d021467_P001	Maize	cytosol	45.79	41.65

Protein Annotations

MapMan:35.2	EnsemblPlantsGene:Bra001083	EnsemblPlants:Bra001083.1	EnsemblPlants:Bra001083.1-P	GO:GO:0003674	GO:GO:0003714
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:1903507
UniProt:M4CA54	PFAM:PF12070	PIRSF:PIRSF013022	PANTHER:PTHR21243	PANTHER:PTHR21243:SF13	InterPro:SCAI
InterPro:SCAI_metazoan/Viridiplantae	UniParc:UPI000254093F	SEG:seg	:	:	:

Description

AT3G03570 (E=2e-303) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP013022 (InterPro:IPR016607); BEST Arabidopsis thaliana protein match is: signal transducer (TAIR:AT4G40050.1); Has 153 Blast hits to 150 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

Coordinates

chrA03:+:14639492..14643117

Molecular Weight (calculated)

68161.9 Da

IEP (calculated)

8.123

GRAVY (calculated)

-0.146

Length

605 amino acids

Sequence
(BLAST)

001: MSQLITGNSI PLSEVYWSLV NKADKKFSKI RDLPFYERSR YENYFFKVFK VYTQLWKFQQ ENRQKLVEAG LKRWEIGEIA SRIAQLYYGH YMRTSDAGYL
101: AESYVFYEAI LTREYFKDGL FQDLNIANKQ LRFLARFLMV CLVLGRREMV HQLVEQFRRL IDECKRTFQE NDFKEWKVVA QEIVRFLKSD TAFMNIRPLR
201: YSLVLDPNLD ASTPRASRSL RLTDAILSSY HYNEVKYSEL TLDSFRMLQC LEWEPSGSLY QSAGPKMGPN APTGASRVNS QNVTDPTLPP NPRKAVLYRP
301: SITNFLALLA TICEELPSNG VVLIYLSASG KIGQTSLSPL GGRSVTSVEE NILRDFESHT IKQDGDPSVQ TKPSGERPGQ SLRQISEDAV EHGLSFGSHG
401: LTGPSCIYPS DLVPFTRKPL FIIIDSDNST AFKNICGAEK GEPAALLLSP SHTPPLISAD FSRQPSGSLF TIFLTAPVQA FCLLIGISGS DIETDVFTKA
501: ERVLSSSMNE WASTLAASDT LHPVWSQILK DPFLRRLLLR FIFCRAVLAL YTPVFNNKQN QPECFPSLPE FLLPAAPAIQ AAVLQMANVF GGASKFTLPQ
601: DITML

Best Arabidopsis Sequence Match ( AT3G03570.1 )
(BLAST)

001: MSQQISGNNN IPLSEVYWSL VNKADKKFSK IRDLPFYERS RYENYFFKVF KVYTQLWKFQ QENRQKLVEA GLKRWEIGEI ASRIAQLYYG HYMRTSDAGY
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF

Arabidopsis Description

Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:F4J153]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.