Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99292 | Sorghum | cytosol | 88.42 | 93.63 |
| Os09t0573200-01 | Rice | cytosol, nucleus, plastid | 74.14 | 80.03 |
| TraesCS5A01G213800.2 | Wheat | cytosol | 70.68 | 74.37 |
| HORVU6Hr1G032750.1 | Barley | cytosol, nucleus | 38.5 | 74.2 |
| HORVU5Hr1G062040.1 | Barley | cytosol, peroxisome | 70.53 | 73.97 |
| TraesCS5B01G209900.1 | Wheat | cytosol | 70.38 | 73.93 |
| TraesCS5D01G218200.1 | Wheat | cytosol | 70.83 | 72.13 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.92 | 51.39 |
| KRH48973 | Soybean | cytosol | 42.26 | 48.36 |
| KRH66307 | Soybean | cytosol | 42.26 | 48.12 |
| Bra001083.1-P | Field mustard | cytosol, extracellular, peroxisome | 41.65 | 45.79 |
| CDX74216 | Canola | cytosol, extracellular, peroxisome | 41.65 | 45.79 |
| Solyc01g081030.2.1 | Tomato | nucleus | 42.41 | 45.63 |
| CDX92045 | Canola | cytosol, nucleus, peroxisome | 41.5 | 45.62 |
| AT3G03570.1 | Thale cress | cytosol, nucleus, peroxisome | 41.05 | 44.98 |
| Zm00001d005957_P001 | Maize | cytosol | 6.17 | 43.62 |
| Zm00001d020807_P003 | Maize | cytosol | 38.8 | 43.36 |
| VIT_15s0045g01090.t01 | Wine grape | cytosol | 40.45 | 42.83 |
Protein Annotations
| EntrezGene:100278709 | MapMan:35.2 | UniProt:A0A1D6IBA7 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:1903507 | ProteinID:ONM57233.1 |
| PFAM:PF12070 | PANTHER:PTHR21243 | PANTHER:PTHR21243:SF15 | InterPro:SCAI | UniParc:UPI0008430ADF | EnsemblPlantsGene:Zm00001d021467 |
| EnsemblPlants:Zm00001d021467_P001 | EnsemblPlants:Zm00001d021467_T001 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7:+:152926221..152935720
Molecular Weight (calculated)
74467.1 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.248
Length
665 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASPQQQGQ GGPGSGGWTP EQFWSLLDKA DRRFARVRDL PSFGRQEPDE FAKAFRAYTQ LWRMQQEHRH RLLDAGLRRW QVGEIAARIA HLYYAQYQRT
101: ADTALLSEAF VFYHAVLDRA YFQDADHHLA PAKHLRFLAR FLLVALLLGR RSHTVPRLAS DIRTLLDDSK KSFQDAEYKE WKHVVQEIAR FLRADSPFMN
201: MRPLRYSYAF DPPPDTLRTV PTTVKKRGLV LSDTILCSYY PNEVKFTDLS IDVFRMVQCL EWEPCGSFAL NDGYSAHDES GQNQPNLLKD LRDAALPPNP
301: LKTILYRPSV THFLTVLSTK CEELPSNGIM LIYLSATGEM GTSGFCPDTG ENVLSNFNKF DISSLSHTSS KENKEPCLWL GCRETEGSNC IYPGDLIPFT
401: RRPLFLVIDS STSYAFKAGL FDLFPSLELS NHYLDNEGWR SFPFLAYLNL LGTKGLSIHG TERGETSAML LSPSSRSSAA GFSGDSTRHS GSQFTMFLTS
501: PLQAFCLLLG NNGTDIDRDA YNKAEELLLL SLNEWAATLV ASSSLHSIWV EVLGDPLLRR LLLRFIFCRA THSLFKPTNH KTEFLPTCMP PLPESVDAES
601: MLSQSCVLRV ASFFGAASQF SFAEVTTWPD VDSEEAVVTS SSGSANKGVP ETARDSDISN SSSSF
101: ADTALLSEAF VFYHAVLDRA YFQDADHHLA PAKHLRFLAR FLLVALLLGR RSHTVPRLAS DIRTLLDDSK KSFQDAEYKE WKHVVQEIAR FLRADSPFMN
201: MRPLRYSYAF DPPPDTLRTV PTTVKKRGLV LSDTILCSYY PNEVKFTDLS IDVFRMVQCL EWEPCGSFAL NDGYSAHDES GQNQPNLLKD LRDAALPPNP
301: LKTILYRPSV THFLTVLSTK CEELPSNGIM LIYLSATGEM GTSGFCPDTG ENVLSNFNKF DISSLSHTSS KENKEPCLWL GCRETEGSNC IYPGDLIPFT
401: RRPLFLVIDS STSYAFKAGL FDLFPSLELS NHYLDNEGWR SFPFLAYLNL LGTKGLSIHG TERGETSAML LSPSSRSSAA GFSGDSTRHS GSQFTMFLTS
501: PLQAFCLLLG NNGTDIDRDA YNKAEELLLL SLNEWAATLV ASSSLHSIWV EVLGDPLLRR LLLRFIFCRA THSLFKPTNH KTEFLPTCMP PLPESVDAES
601: MLSQSCVLRV ASFFGAASQF SFAEVTTWPD VDSEEAVVTS SSGSANKGVP ETARDSDISN SSSSF
001: MSQQISGNNN IPLSEVYWSL VNKADKKFSK IRDLPFYERS RYENYFFKVF KVYTQLWKFQ QENRQKLVEA GLKRWEIGEI ASRIAQLYYG HYMRTSDAGY
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:F4J153]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.