Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74216 | Canola | cytosol, extracellular, peroxisome | 98.18 | 98.18 |
| AT3G03570.1 | Thale cress | cytosol, nucleus, peroxisome | 86.78 | 86.49 |
| KRH66307 | Soybean | cytosol | 60.99 | 63.18 |
| KRH48973 | Soybean | cytosol | 60.33 | 62.82 |
| Solyc01g081030.2.1 | Tomato | nucleus | 59.83 | 58.58 |
| VIT_15s0045g01090.t01 | Wine grape | cytosol | 60.5 | 58.28 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.04 | 51.55 |
| HORVU6Hr1G032750.1 | Barley | cytosol, nucleus | 26.12 | 45.8 |
| HORVU5Hr1G062040.1 | Barley | cytosol, peroxisome | 47.44 | 45.27 |
| CDX69358 | Canola | cytosol | 34.21 | 45.2 |
| Os09t0573200-01 | Rice | cytosol, nucleus, plastid | 45.95 | 45.13 |
| TraesCS5A01G213800.2 | Wheat | cytosol | 47.11 | 45.09 |
| TraesCS5B01G209900.1 | Wheat | cytosol | 46.78 | 44.71 |
| CDX75699 | Canola | cytosol | 45.12 | 44.54 |
| EER99292 | Sorghum | cytosol | 45.79 | 44.11 |
| TraesCS5D01G218200.1 | Wheat | cytosol | 46.61 | 43.19 |
| Zm00001d021467_P001 | Maize | cytosol | 45.62 | 41.5 |
| CDX69359 | Canola | nucleus | 7.77 | 39.83 |
Protein Annotations
| EnsemblPlants:CDX92045 | EnsemblPlantsGene:GSBRNA2T00153707001 | GO:A0A078DRY6 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:SCAI |
| InterPro:SCAI_metazoan/Viridiplantae | PANTHER:PTHR21243 | PANTHER:PTHR21243:SF13 | PFAM:PF12070 | PIRSF:PIRSF013022 | ProteinID:CDX92045 |
| ProteinID:CDX92045.1 | SEG:seg | UniParc:UPI0004EE10E5 | MapMan:35.2 | : | : |
Description
BnaC03g33470D
Coordinates
chrLK031870:+:1388811..1392899
Molecular Weight (calculated)
68265.0 Da
IEP (calculated)
7.942
GRAVY (calculated)
-0.157
Length
605 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQLITGNNI PLSEVYWSLV NKADKKFSKI RDLPFYERSR YENYFFKVFK VYTQLWKFQQ ENRQKLVEAG LKRWEIGEIA SRIAQLYYGH YMRTSDAGYL
101: AESYVFYEAI LTREYFKDGL FQDLNIANKQ LRFLARFLMV CLVLGRREMV HQLVEQFRRL IDECKRTFQE NDFKEWKVVA QEIVRFLKSD TAFMNIRPLR
201: YSLVLDPNLD ASTPRASRSL RLTDAILSSY HYNEVKYSEL TLDSFRMLQC LEWEPSGSLY QSAGPKMGPN APTGASRVNS QSMTDPTLPP NPRKAVLYRP
301: SITHFLALLA TICEELPSNG VVLIYLSASG NIGQTSLSPL GGRSVTGGEE NILRDFESHT IKQDGDPSVQ TKPSGERPAQ SLRQISEDAV EHGLSFGSHG
401: LTGPSCIYPS DLVPFTRKPL FIIIDSDNST AFKNICGAEK GEPAALLLSP SHTPPLISAD FSRQPSGSLF TIFLTAPVQA FCLLIGISGS DLETDVFTKA
501: ERVLSSSMNE WASTLAASDT LHPVWSQILK DPFLRRLLLR FIFCRAVLAL YTPVFNNKQN QPECFPYLPE FLLPAAPAIQ AAVLQMANIF GGTSKFTLPQ
601: DITML
101: AESYVFYEAI LTREYFKDGL FQDLNIANKQ LRFLARFLMV CLVLGRREMV HQLVEQFRRL IDECKRTFQE NDFKEWKVVA QEIVRFLKSD TAFMNIRPLR
201: YSLVLDPNLD ASTPRASRSL RLTDAILSSY HYNEVKYSEL TLDSFRMLQC LEWEPSGSLY QSAGPKMGPN APTGASRVNS QSMTDPTLPP NPRKAVLYRP
301: SITHFLALLA TICEELPSNG VVLIYLSASG NIGQTSLSPL GGRSVTGGEE NILRDFESHT IKQDGDPSVQ TKPSGERPAQ SLRQISEDAV EHGLSFGSHG
401: LTGPSCIYPS DLVPFTRKPL FIIIDSDNST AFKNICGAEK GEPAALLLSP SHTPPLISAD FSRQPSGSLF TIFLTAPVQA FCLLIGISGS DLETDVFTKA
501: ERVLSSSMNE WASTLAASDT LHPVWSQILK DPFLRRLLLR FIFCRAVLAL YTPVFNNKQN QPECFPYLPE FLLPAAPAIQ AAVLQMANIF GGTSKFTLPQ
601: DITML
001: MSQQISGNNN IPLSEVYWSL VNKADKKFSK IRDLPFYERS RYENYFFKVF KVYTQLWKFQ QENRQKLVEA GLKRWEIGEI ASRIAQLYYG HYMRTSDAGY
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:F4J153]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.