Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99292 | Sorghum | cytosol | 81.33 | 79.78 |
| HORVU6Hr1G032750.1 | Barley | cytosol, nucleus | 43.83 | 78.26 |
| HORVU5Hr1G062040.1 | Barley | cytosol, peroxisome | 79.22 | 76.97 |
| TraesCS5A01G213800.2 | Wheat | cytosol | 78.9 | 76.9 |
| TraesCS5B01G209900.1 | Wheat | cytosol | 78.41 | 76.3 |
| TraesCS5D01G218200.1 | Wheat | cytosol | 78.9 | 74.43 |
| Zm00001d021467_P001 | Maize | cytosol | 80.03 | 74.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.06 | 51.55 |
| KRH48973 | Soybean | cytosol | 46.59 | 49.4 |
| KRH66307 | Soybean | cytosol | 46.75 | 49.32 |
| Solyc01g081030.2.1 | Tomato | nucleus | 46.92 | 46.76 |
| CDX92045 | Canola | cytosol, nucleus, peroxisome | 45.13 | 45.95 |
| CDX74216 | Canola | cytosol, extracellular, peroxisome | 44.97 | 45.79 |
| Bra001083.1-P | Field mustard | cytosol, extracellular, peroxisome | 44.97 | 45.79 |
| AT3G03570.1 | Thale cress | cytosol, nucleus, peroxisome | 44.97 | 45.63 |
| VIT_15s0045g01090.t01 | Wine grape | cytosol | 44.64 | 43.79 |
| Os09t0470900-01 | Rice | cytosol | 41.07 | 42.52 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4347932 | ProteinID:BAD54686.1 | ProteinID:BAT09551.1 | ProteinID:EEE70284.1 | GO:GO:0003674 |
| GO:GO:0003714 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:1903507 | EnsemblPlantsGene:Os09g0573200 | EnsemblPlants:Os09t0573200-01 | PFAM:PF12070 | PIRSF:PIRSF013022 |
| PANTHER:PTHR21243 | PANTHER:PTHR21243:SF15 | UniProt:Q5Z480 | InterPro:SCAI | InterPro:SCAI_metazoan/Viridiplantae | UniParc:UPI00004470C5 |
| RefSeq:XP_015612130.1 | SEG:seg | : | : | : | : |
Description
Hypothetical conserved gene. (Os09t0573200-01);Protein of unknown function DUF3550/UPF0682 domain containing protein. (Os09t0573200-02);Similar to predicted protein. (Os09t0573200-03)
Coordinates
chr9:+:22934014..22939008
Molecular Weight (calculated)
69154.6 Da
IEP (calculated)
6.709
GRAVY (calculated)
-0.170
Length
616 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPHQVVA PQPQSQAQAG GGGGGGGGTA EQFWSLLDKA DRRFARVRDL PLFGRREPDE YGKVFRIYTQ LWRMQQEHRH RLLDAGLRRW QVGEIAARIA
101: HLYYSQYQRT SDTALLSEAF VFYHAVLDRG YFLADAADHL FAPTKHLRFL ARFLLVALLL ARRADTVPRL TTHIRTLLDD SKKTLQEADY KEWKHVVQEI
201: ARFLRADSPF INMRPLRYSY AFDPPPDTLP TVPPTVKKRG LVLNDAMLCS YYQNEIKFTD LTIDVFRMLQ CLEWEPCGSF ALTNGYSTRD ESGQNHPNLL
301: KDLRDAALPP NPLKTILYRP SVTHFLTVLA TKCEELPSNG MMLIYLSAAG EVGSSGFCPD TNEMVVSSLN KFDISNTSTI NVNEDNGPRL WLGCREGEGS
401: NCIYPCDLIP FTRRPLFLVI DSNASYSFKS IHGFEKGETT AMLLSPSCRS SSAGFSGDSV RQIGSQFTMF LTAPLQAFCH LIGNNGVDID RDTYNKAEEL
501: LSLSLNEWAT TLVASSSLHP VWVEVLGDPL LRRLLLRFIF CRAAHSIFKP TYHKVDFLPT CTPPLPESVD AESMLSQCCL LRVASFFGAT NQFSFSEVTT
601: WPEVDVEEAA VVNPSI
101: HLYYSQYQRT SDTALLSEAF VFYHAVLDRG YFLADAADHL FAPTKHLRFL ARFLLVALLL ARRADTVPRL TTHIRTLLDD SKKTLQEADY KEWKHVVQEI
201: ARFLRADSPF INMRPLRYSY AFDPPPDTLP TVPPTVKKRG LVLNDAMLCS YYQNEIKFTD LTIDVFRMLQ CLEWEPCGSF ALTNGYSTRD ESGQNHPNLL
301: KDLRDAALPP NPLKTILYRP SVTHFLTVLA TKCEELPSNG MMLIYLSAAG EVGSSGFCPD TNEMVVSSLN KFDISNTSTI NVNEDNGPRL WLGCREGEGS
401: NCIYPCDLIP FTRRPLFLVI DSNASYSFKS IHGFEKGETT AMLLSPSCRS SSAGFSGDSV RQIGSQFTMF LTAPLQAFCH LIGNNGVDID RDTYNKAEEL
501: LSLSLNEWAT TLVASSSLHP VWVEVLGDPL LRRLLLRFIF CRAAHSIFKP TYHKVDFLPT CTPPLPESVD AESMLSQCCL LRVASFFGAT NQFSFSEVTT
601: WPEVDVEEAA VVNPSI
001: MSQQISGNNN IPLSEVYWSL VNKADKKFSK IRDLPFYERS RYENYFFKVF KVYTQLWKFQ QENRQKLVEA GLKRWEIGEI ASRIAQLYYG HYMRTSDAGY
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
101: LSESYVFYEA ILTREYFKDG LFQDLNIANK QLRFLARFLM VCLVLGRREM VHQLVDQFKR LIDECKRTFQ ETDFKEWKVV AQEIVRFLKS DTAFMNIRPL
201: RYSLVLDPNL DAGTPRASRS LRLTDAILSS YYCNEVKYSE LTLDSFRMLQ CLEWEPSGSL YQSTGAKMGQ NAPVGVARIN SQSMNDPTLP PNPRKAVLYR
301: PSITHFLAVL ATICEELPSH GILLLYLSAS GKIGQISSSP LSARSATSVE ENILRDFESH TIKQETEPSL QITPSGQSLR QISEDAVSTP CGLSFGSHGL
401: TGSSYIYPSD LVPFTRKPLF IIIDSDSSTV FKNICGAEKG EPAALLLSPS HTPPLISADF SRQPSGSLFT IFLTSPVQAF CLLSEISASD METDIFTKAE
501: KLLSSSMNEW ASTLATSDTL HPVWSQILKD PFLRRLLLRF IFCRAVLALY TPVFNNKQNQ PECCPSLPES LLPTAPAVQS AVFQMANVFG ATSKFTIPQD
601: ITMLESF
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:F4J153]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.