Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G256300.2 | Wheat | cytosol | 97.3 | 97.13 |
| TraesCS5A01G249100.1 | Wheat | cytosol | 96.79 | 96.63 |
| HORVU5Hr1G070270.8 | Barley | plastid | 88.34 | 86.3 |
| Os09t0470900-01 | Rice | cytosol | 84.8 | 84.37 |
| EER96902 | Sorghum | cytosol | 84.12 | 83.7 |
| Zm00001d020807_P003 | Maize | cytosol | 83.95 | 83.53 |
| Zm00001d005957_P001 | Maize | cytosol | 11.82 | 74.47 |
| GSMUA_Achr10P... | Banana | cytosol | 55.24 | 53.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.73 | 51.84 |
| GSMUA_Achr7P12730_001 | Banana | cytosol | 56.59 | 50.3 |
| TraesCS5B01G209900.1 | Wheat | cytosol | 42.91 | 40.13 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G246800.3 | EnsemblPlantsGene:TraesCS5B01G246800 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:SCAI | PANTHER:PTHR21243 |
| PANTHER:PTHR21243:SF13 | PFAM:PF12070 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5B:+:428575201..428581353
Molecular Weight (calculated)
66182.8 Da
IEP (calculated)
8.489
GRAVY (calculated)
-0.219
Length
592 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGEPSGAY REFKALVEAA DRKFARARDL PLYGGGDHHS RKAFKAYTRL WRLQQDRRRD LVAAGLRRWE IGEVASRIGQ LYYARYLRTA EPRSLVGAYV
101: FYEAIYSRGY FAAPANANAS AAAGGGAKHQ GLLIRYKELR FIARFLVVAM LMRRAEAVDH LVARLRSLVQ ESKSAYPKTN FKEWKQVLQE LERFLKADGA
201: YKGSRSLRYD NLFDSYASNL ASIARFHSKR VLKLKEAVLT SYHRNEVKFT ELTLDTFRML QSLEWEPTGS YQIAVKELTE NGTMSDQSGP SGLIDIHLST
301: EISDGNLPSN PQRAIIYHPT VSHLIAVLAT ICEELSQDSI LLIYISASGL ADQNAYQKYA SSSTSRSRPA SAFLIDKPNS HASSDDHVWL GPRGNGGPNN
401: LYPEDLIPFT RYPLFLVIDS ENSHAFKAIH DAEKGEPAAL LLSPRIASAM PGVESMGNGG QFTYFLTAPM QAFCQLAGIT SDIDSDTYAN AENILFSALE
501: QYEEILSTSV GLNIVWGQIL PDPFLRRLIL RFIFCRAVFF YFHAEEHGEH LPSCLPSLPE SVSPNAKAIK TPILLLAENL VVSNRFHFGN RT
101: FYEAIYSRGY FAAPANANAS AAAGGGAKHQ GLLIRYKELR FIARFLVVAM LMRRAEAVDH LVARLRSLVQ ESKSAYPKTN FKEWKQVLQE LERFLKADGA
201: YKGSRSLRYD NLFDSYASNL ASIARFHSKR VLKLKEAVLT SYHRNEVKFT ELTLDTFRML QSLEWEPTGS YQIAVKELTE NGTMSDQSGP SGLIDIHLST
301: EISDGNLPSN PQRAIIYHPT VSHLIAVLAT ICEELSQDSI LLIYISASGL ADQNAYQKYA SSSTSRSRPA SAFLIDKPNS HASSDDHVWL GPRGNGGPNN
401: LYPEDLIPFT RYPLFLVIDS ENSHAFKAIH DAEKGEPAAL LLSPRIASAM PGVESMGNGG QFTYFLTAPM QAFCQLAGIT SDIDSDTYAN AENILFSALE
501: QYEEILSTSV GLNIVWGQIL PDPFLRRLIL RFIFCRAVFF YFHAEEHGEH LPSCLPSLPE SVSPNAKAIK TPILLLAENL VVSNRFHFGN RT
001: MAGEDVSSNF RALVENADRK FARVRDLPAF GRAQSHYFQK VFKAYMKLWN YQQSHRSKLV ESGLNRWEIG EIASRIGQLY FSQYMRTSEA RFLLEAFVFY
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:Q94BN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.