Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 74.77 | 80.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.41 | 68.64 |
| EER96902 | Sorghum | cytosol | 52.55 | 58.82 |
| Zm00001d020807_P003 | Maize | cytosol | 51.5 | 57.65 |
| Os09t0470900-01 | Rice | cytosol | 51.05 | 57.14 |
| TraesCS5D01G256300.2 | Wheat | cytosol | 50.45 | 56.66 |
| TraesCS5B01G246800.3 | Wheat | cytosol | 50.3 | 56.59 |
| TraesCS5A01G249100.1 | Wheat | cytosol | 50.0 | 56.16 |
| Zm00001d005957_P001 | Maize | cytosol | 7.66 | 54.26 |
| HORVU5Hr1G070270.8 | Barley | plastid | 46.25 | 50.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.79 | 44.12 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P12730_001 | EnsemblPlants:GSMUA_Achr7T12730_001 | EnsemblPlantsGene:GSMUA_Achr7G12730_001 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:1903507 |
| InterPro:SCAI | ncoils:Coil | PANTHER:PTHR21243 | PANTHER:PTHR21243:SF13 | PFAM:PF12070 | SEG:seg |
| UniParc:UPI000296990E | UniProt:M0TH11 | MapMan:35.2 | : | : | : |
Description
Putative Protein SCAI [Source:GMGC_GENE;Acc:GSMUA_Achr7G12730_001]
Coordinates
chr7:-:10243537..10248813
Molecular Weight (calculated)
74139.3 Da
IEP (calculated)
7.959
GRAVY (calculated)
-0.130
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEDDRGAV ASDDLAQFRS LVHAADRKFA RVRDLPPWAR GPLHVLHCRK AFKAYTRLWQ FQQQRRRELL AGGLRRWEIG DIASRIGQLY YGQYQRTSEV
101: RFLLEAYVFY EAIVSRGYFE AARAASAPDL NLRYKELRFY VRFLIVALLL NRTDEVRQLA DRFRALVEES KAAFPATNFK EWKQVAQEIS RFLKADASSK
201: ISRPLRYNVM FDAHPSSVPH IARFHANRVL RLQDALLTSY CRNEIKLAEL TLDTFRMLQC LEWEPSGSSY QLPKKESCEN GAFSDQSGTS GLIDINLAAD
301: LMDPDLPPNP RKAVIYHPSV SHLLAVTATI CEELSSDSIL LVYISASGLL CAAGKTDCSV ASQKDFHGKS SNSSKANHAS RKKDSSLSQP AADDTLNSNT
401: NLRSYVCLGS QGTGGSNLYP EDLIPFTRKP LFLIIDGENS QSFKAVRANI NAIISRLLGI KVQFTKTASL LASLGLCTLT ISKSCISGSL VYRTIHGAER
501: GETSALLLSH EKLLSVSDTG LTSSGSQFTY FLTAPLQAFY QLVGLSSDVE DDAYSNAESL LSSALAEWEV ALCTSYSLDQ VWAQVLSDPF LRRLILRFIF
601: CRAVISLFCS SGDSAGHLPE CLPNLPESLS PESAVTQIYI HHLAERLGVS NLFQFRDSIR DSLLSR
101: RFLLEAYVFY EAIVSRGYFE AARAASAPDL NLRYKELRFY VRFLIVALLL NRTDEVRQLA DRFRALVEES KAAFPATNFK EWKQVAQEIS RFLKADASSK
201: ISRPLRYNVM FDAHPSSVPH IARFHANRVL RLQDALLTSY CRNEIKLAEL TLDTFRMLQC LEWEPSGSSY QLPKKESCEN GAFSDQSGTS GLIDINLAAD
301: LMDPDLPPNP RKAVIYHPSV SHLLAVTATI CEELSSDSIL LVYISASGLL CAAGKTDCSV ASQKDFHGKS SNSSKANHAS RKKDSSLSQP AADDTLNSNT
401: NLRSYVCLGS QGTGGSNLYP EDLIPFTRKP LFLIIDGENS QSFKAVRANI NAIISRLLGI KVQFTKTASL LASLGLCTLT ISKSCISGSL VYRTIHGAER
501: GETSALLLSH EKLLSVSDTG LTSSGSQFTY FLTAPLQAFY QLVGLSSDVE DDAYSNAESL LSSALAEWEV ALCTSYSLDQ VWAQVLSDPF LRRLILRFIF
601: CRAVISLFCS SGDSAGHLPE CLPNLPESLS PESAVTQIYI HHLAERLGVS NLFQFRDSIR DSLLSR
001: MAGEDVSSNF RALVENADRK FARVRDLPAF GRAQSHYFQK VFKAYMKLWN YQQSHRSKLV ESGLNRWEIG EIASRIGQLY FSQYMRTSEA RFLLEAFVFY
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
101: EAILKRSYFD EAQGKDLGAR FKELRFYARF LLVSLIVDRK QMLLHLADKL RLLVDHSISN FRETNFKEWR LVVQEITRFI ESDTNLTYLR PLRYCAMLDS
201: YPASQTYLAR FHAKKLFKFR DALLASYHRN EVKYAEVTLD TYRMMQCLEW EPSGSFYQKK PVEAKENGFV VDHTLTSGLI DMNLAADMAD PSLPPNPRKA
301: ILYRPTVSHL LAVLAMICDE LSPETVMLLY LSASGGPARE NVAQPENSVG SSRTSKSKLL ARASQEQKSY KSEPHSNGKL MSAEYYENHL WLGPRGGSSG
401: SNNLYPGDLI PFTRKPLFLI IDSDTSRAFK VLGGAERGEP VAMLLSPLKP SFENPSTDDT EALNGSQFTF FLTAPLQAFC QMLGLSNTKP DPELCDEAES
501: ILSASFSEWE TILLTSKVLN LVWAQVLPDP FLRRLILRFI FCRSVLTSFS RTEDDDPYLP QCHPNLPELL SSVSKPVQSS VQRLAEHLGV AKSFHFTNT
Arabidopsis Description
Signal transducer, putative (DUF3550/UPF0682) [Source:UniProtKB/TrEMBL;Acc:Q94BN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.