Factsheet for PGSC0003DMT400047243

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g053980.2.1	Tomato	nucleus	96.89	98.17
KRH55958	Soybean	plasma membrane	38.41	83.31
VIT_12s0028g03720.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	63.69	81.07
AT4G03550.1	Thale cress	plasma membrane	74.89	74.38
CDY21974	Canola	plasma membrane	74.89	74.26
CDY48567	Canola	plasma membrane	74.89	74.26
Bra034218.1-P	Field mustard	plasma membrane	74.83	74.24
KRH22386	Soybean	cytosol, plasma membrane, plastid	72.68	73.72
Bra034217.1-P	Field mustard	mitochondrion	9.56	72.84
Os01t0672500-01	Rice	plasma membrane	19.46	72.27
GSMUA_Achr1P27410_001	Banana	cytosol	57.35	70.91
PGSC0003DMT400076360	Potato	plasma membrane	70.7	70.78
Zm00001d043909_P002	Maize	cytosol	68.04	67.62
KXG33086	Sorghum	cytosol	68.04	67.62
TraesCS3D01G246000.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	57.07	66.64
TraesCS3B01G274100.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.84	66.42
TraesCS3A01G245500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.9	66.32
TraesCS2A01G493000.1	Wheat	plasma membrane	16.35	65.83
TraesCS3D01G292500.1	Wheat	cytosol, nucleus, peroxisome	66.4	65.66
HORVU3Hr1G072540.2	Barley	mitochondrion	66.46	65.57
Os01t0754200-03	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	66.35	65.53
TraesCS3B01G327500.1	Wheat	mitochondrion	66.4	65.51
KXG33388	Sorghum	mitochondrion	66.29	65.47
TraesCS3A01G292700.1	Wheat	cytosol	66.4	65.4
HORVU3Hr1G061700.1	Barley	cytosol, plastid	67.93	64.19
Zm00001d043428_P005	Maize	cytosol, plastid	66.06	64.18
TraesCS2B01G521100.1	Wheat	unclear	62.9	62.82
GSMUA_Achr4P01160_001	Banana	plastid	33.6	58.93
HORVU2Hr1G109970.1	Barley	cytosol	54.69	58.01
PGSC0003DMT400018166	Potato	cytosol	6.39	55.39
TraesCS2A01G493100.1	Wheat	mitochondrion	12.33	54.64
Zm00001d041460_P001	Maize	mitochondrion, plasma membrane	13.24	54.17
PGSC0003DMT400034375	Potato	cytosol, mitochondrion, peroxisome, plasma membrane	16.63	52.97
PGSC0003DMT400073787	Potato	plasma membrane	32.07	52.11
PGSC0003DMT400082009	Potato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	32.81	50.52
PGSC0003DMT400039392	Potato	plasma membrane	33.65	50.42
PGSC0003DMT400074555	Potato	plasma membrane	12.73	49.02
PGSC0003DMT400082011	Potato	mitochondrion	46.66	42.35
PGSC0003DMT400065769	Potato	nucleus, plasma membrane, vacuole	2.55	29.61
PGSC0003DMT400018165	Potato	cytosol, peroxisome, plasma membrane	19.34	28.36

Protein Annotations

KEGG:00500+2.4.1.34	EntrezGene:102594698	MapMan:21.7.1	ncoils:Coil	InterPro:FKS1-like_dom1	GO:GO:0000003
GO:GO:0000148	GO:GO:0003674	GO:GO:0003824	GO:GO:0003843	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005886	GO:GO:0005975	GO:GO:0006075
GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009555	GO:GO:0009605	GO:GO:0009607
GO:GO:0009620	GO:GO:0009653	GO:GO:0009719	GO:GO:0009863	GO:GO:0009870	GO:GO:0009965
GO:GO:0009987	GO:GO:0010150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740
GO:GO:0042742	GO:GO:0050832	GO:GO:0052542	GO:GO:0052544	InterPro:Glyco_trans_48	UniProt:M1BKD1
PFAM:PF02364	PFAM:PF14288	EnsemblPlantsGene:PGSC0003DMG400018343	PGSC:PGSC0003DMG400018343	EnsemblPlants:PGSC0003DMT400047243	PANTHER:PTHR12741
PANTHER:PTHR12741:SF23	SMART:SM01205	TMHMM:TMhelix	UniParc:UPI000294CC98	RefSeq:XP_006357481.1	SEG:seg

Description

Transferase, transferring glycosyl groups [Source:PGSC_GENE;Acc:PGSC0003DMG400018343]

Coordinates

chr7:+:49170032..49179986

Molecular Weight (calculated)

205759.0 Da

IEP (calculated)

9.493

GRAVY (calculated)

-0.024

Length

1768 amino acids

Sequence
(BLAST)

0001: MSLRQRSTPA ARQVSIDEEP YNIIPIHNLL ADHPSLRFPE VRAAVAALRS VGDLRRPPFA PWKPHYDLLD WLALFFGFQD SSVRNQREHI VLHLANAQMR
0101: LSPPPDNIDS LDPAVLRRFR RQLLKNYSSW CSFLGLKSNV WLSDRHNSSD HRRELLYVSL YLLIWGESAN LRFVPECLCF IFHNMAMELN KILEDYIDEN
0201: TGRPFLPSIS GENAFLNRIV TPIYETIRAE ADNSRNGTAP HSAWRNYDDI NEYFWSKRCF DKLKWPIDTG STFFVTTNKG KKVGKTGFVE QRSFLNLYRS
0301: FDKLWIMLAL FLQAAIIVAW EGKPYPWQAL ESREVQVRVL TIFFTWSSMR FLQSLLDAGM QYRIISRETP WHGVRMVLKS VVAATWIVVF GAFYGRIWIQ
0401: RNRDGNWSSA ANRRVVNFLE VALVFIAPEL LALALFVLPW IRNFLENTNW RIFYLLSWWF QSRTFVGRGI REGLVDNIKY SLFWVVVLAT KFSFSYFLQI
0501: KPMIVPTRAL LRLRDVKYEW HEFFNHSNRF SVGLLWLPVV LIYLMDIQIW YSIYSSFVGA AVGLFDHLGE IRNMPQLRLR FQFFASAMQF NLMPEEQLLN
0601: AQGTLKSKFK DAMLRLKLRY GFGRPFKKLE SNQVEASKFA LIWNEIIATF REEDILNDRE VELLELPQNT WNVRVIRWPC LLLCNEVLLG LSQAKELVDA
0701: PDRWLWHKIS KYEYRRCAVI EAYDSTRHLL LEIVKLNSEE HSIITTFFQQ IDQWILLEKF TKYYNLTALP QIRGKLIALL DLILKPKKDV DKIVNVLQAL
0801: YEVATRDFLK EKMTGDQLRE EGLALQASAT RLLFENVVSL PDPENETFYR QARRLNTILT SRDSMSNIPR NLEARRRLAF FSNSLFMNMP HAPQVEKMMA
0901: FSVLTPYYNE DVLYNREQLR TENEDGISTL YYLQTIYADE WENFLQRMRR EGMVDEKKEL WTTKLRDLRL WASYRGQTLT RTVRGMMYYY RALKMLAFLD
1001: SACEMDIREG SVELGSMRHD DSIGGLSSER SQSSRRLSRA DSSVSLLFKG HEYGTALMKF TYVVACQIYG AQKAKKDPHA EEILYLMKNN EALRVAYVDE
1101: VPTGRDEKDY YSVLVKYDQK LEREVEIYRV KLPGPLKLGE GKPENQNHAF IFTRGDAVQT IDMNQDNYFE EALKMRNLLE EFKRYYGIRK PTILGVREHI
1201: FTGSVSSLAW FMSAQEMSFV TLGQRVLANP LKIRMHYGHP DVFDRFWFLT RGGISKASKV INISEDIFAG FNCTLRGGNV THHEYIQVGK GRDVGLNQIS
1301: MFEAKVASGN GEQVLSRDVY RLGHRLDFFR MLSFFYTTVG FFFNTMMIVL TVYAFLWGRL YLALSGVEGS VASDTTDNNR ALGAILNQQF IIQLGLFTAL
1401: PMIVETSLEH GFLTSIWEFL TMMLQLSSVF YTFSMGTRAH YFGRTILHGG AKYRATGRGF VVQHKCFAEN YRLYARSHFV KAIELGLILT VYAAYSPVAK
1501: GTFTYIALTI SSWFLVVSWI LGPFVFNPSG FDWLKTVYDF DDFMNWIWYR GSVFAKSDQS WEKWWEEEQD HLRTTGLWGK ILEIILDLRF FFFQYGIVYH
1601: LGIAAGSKSI AVYLLSWICV VVALGFFNIT AYAREKYAAR EHIYFRLVQL LAVLFFIVVI VALLQFTAFK FGDLFVSLLA FVPTGWGFIS IAQVLRPFLQ
1701: KSMIWGTVVS VARLYEIMFG IIVMVPVAVL SWLPGFQPMQ TRILFNEAFS RGLRIFQIVT GKKPKSDV

Best Arabidopsis Sequence Match ( AT4G03550.1 )
(BLAST)

0001: MSLRHRTVPP QTGRPLAAEA VGIEEEPYNI IPVNNLLADH PSLRFPEVRA AAAALKTVGD LRRPPYVQWR SHYDLLDWLA LFFGFQKDNV RNQREHMVLH
0101: LANAQMRLSP PPDNIDSLDS AVVRRFRRKL LANYSSWCSY LGKKSNIWIS DRNPDSRREL LYVGLYLLIW GEAANLRFMP ECICYIFHNM ASELNKILED
0201: CLDENTGQPY LPSLSGENAF LTGVVKPIYD TIQAEIDESK NGTVAHCKWR NYDDINEYFW TDRCFSKLKW PLDLGSNFFK SRGKSVGKTG FVERRTFFYL
0301: YRSFDRLWVM LALFLQAAII VAWEEKPDTS SVTRQLWNAL KARDVQVRLL TVFLTWSGMR LLQAVLDAAS QYPLVSRETK RHFFRMLMKV IAAAVWIVAF
0401: TVLYTNIWKQ KRQDRQWSNA ATTKIYQFLY AVGAFLVPEI LALALFIIPW MRNFLEETNW KIFFALTWWF QGKSFVGRGL REGLVDNIKY STFWIFVLAT
0501: KFTFSYFLQV KPMIKPSKLL WNLKDVDYEW HQFYGDSNRF SVALLWLPVV LIYLMDIQIW YAIYSSIVGA VVGLFDHLGE IRDMGQLRLR FQFFASAIQF
0601: NLMPEEQLLN ARGFGNKFKD GIHRLKLRYG FGRPFKKLES NQVEANKFAL IWNEIILAFR EEDIVSDREV ELLELPKNSW DVTVIRWPCF LLCNELLLAL
0701: SQARELIDAP DKWLWHKICK NEYRRCAVVE AYDSIKHLLL SIIKVDTEEH SIITVFFQII NQSIQSEQFT KTFRVDLLPK IYETLQKLVG LVNDEETDSG
0801: RVVNVLQSLY EIATRQFFIE KKTTEQLSNE GLTPRDPASK LLFQNAIRLP DASNEDFYRQ VRRLHTILTS RDSMHSVPVN LEARRRIAFF SNSLFMNMPH
0901: APQVEKMMAF SVLTPYYSEE VVYSKEQLRN ETEDGISTLY YLQTIYADEW KNFKERMHRE GIKTDSELWT TKLRDLRLWA SYRGQTLART VRGMMYYYRA
1001: LKMLAFLDSA SEMDIREGAQ ELGSVRNLQG ELGGQSDGFV SENDRSSLSR ASSSVSTLYK GHEYGTALMK FTYVVACQIY GSQKAKKEPQ AEEILYLMKQ
1101: NEALRIAYVD EVPAGRGETD YYSVLVKYDH QLEKEVEIFR VKLPGPVKLG EGKPENQNHA MIFTRGDAVQ TIDMNQDSYF EEALKMRNLL QEYNHYHGIR
1201: KPTILGVREH IFTGSVSSLA WFMSAQETSF VTLGQRVLAN PLKVRMHYGH PDVFDRFWFL SRGGISKASR VINISEDIFA GFNCTLRGGN VTHHEYIQVG
1301: KGRDVGLNQI SMFEAKVASG NGEQVLSRDV YRLGHRLDFF RMLSFFYTTV GFFFNTMMVI LTVYAFLWGR VYLALSGVEK SALADSTDTN AALGVILNQQ
1401: FIIQLGLFTA LPMIVEWSLE EGFLLAIWNF IRMQIQLSAV FYTFSMGTRA HYFGRTILHG GAKYRATGRG FVVEHKGFTE NYRLYARSHF VKAIELGLIL
1501: IVYASHSPIA KDSLIYIAMT ITSWFLVISW IMAPFVFNPS GFDWLKTVYD FEDFMNWIWY QGRISTKSEQ SWEKWWYEEQ DHLRNTGKAG LFVEIILVLR
1601: FFFFQYGIVY QLKIANGSTS LFVYLFSWIY IFAIFVLFLV IQYARDKYSA KAHIRYRLVQ FLLIVLAILV IVALLEFTHF SFIDIFTSLL AFIPTGWGIL
1701: LIAQTQRKWL KNYTIFWNAV VSVARMYDIL FGILIMVPVA FLSWMPGFQS MQTRILFNEA FSRGLRIMQI VTGKKSKGDV

Arabidopsis Description

CALS12Callose synthase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT82]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.