CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043428_P005	Maize	cytosol, plastid	95.92	94.34
TraesCS3B01G327500.1	Wheat	mitochondrion	87.43	87.33
TraesCS3D01G292500.1	Wheat	cytosol, nucleus, peroxisome	87.21	87.3
HORVU3Hr1G072540.2	Barley	mitochondrion	87.32	87.22
TraesCS3A01G292700.1	Wheat	cytosol	86.76	86.52
Os01t0754200-03	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	85.92	85.92
CDY16627	Canola	cytosol	25.47	75.75
CDY44742	Canola	cytosol	25.36	75.42
KRH55958	Soybean	plasma membrane	34.19	75.09
GSMUA_Achr1P27410_001	Banana	cytosol	56.31	70.49
VIT_12s0028g03720.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	53.91	69.47
KRH21444	Soybean	mitochondrion	54.64	67.63
VIT_00s0265g00050.t01	Wine grape	cytosol	61.23	66.75
PGSC0003DMT400047243	Potato	cytosol	65.47	66.29
Solyc07g053980.2.1	Tomato	nucleus	64.19	65.85
KXG33086	Sorghum	cytosol	65.42	65.82
PGSC0003DMT400076360	Potato	plasma membrane	64.58	65.46
KRH22386	Soybean	cytosol, plasma membrane, plastid	63.52	65.23
Solyc02g078230.1.1	Tomato	cytosol	64.75	64.93
AT4G04970.1	Thale cress	cytosol	63.52	64.31
KRH10873	Soybean	plasma membrane	64.47	64.15
Bra029541.1-P	Field mustard	cytosol, nucleus, plasma membrane	63.18	63.97
AT4G03550.1	Thale cress	plasma membrane	63.24	63.6
Bra034218.1-P	Field mustard	plasma membrane	63.3	63.58
CDY21974	Canola	plasma membrane	63.3	63.54
CDY48567	Canola	plasma membrane	63.3	63.54
GSMUA_Achr4P01160_001	Banana	plastid	32.91	58.43
CDY16628	Canola	cytosol, nucleus, plasma membrane	34.8	56.38
CDY37215	Canola	plasma membrane	22.12	56.33
CDY44741	Canola	cytosol, nucleus, plasma membrane	34.58	56.02
OQU93478	Sorghum	plasma membrane	8.99	53.85
Bra034217.1-P	Field mustard	mitochondrion	6.54	50.43
OQU75971	Sorghum	cytosol	46.48	43.67
OQU86033	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	45.75	41.96
EES03083	Sorghum	cytosol	43.02	41.87
EER90434	Sorghum	plastid	45.87	41.78
KRH46038	Soybean	cytosol	43.02	41.64
OQU93328	Sorghum	mitochondrion	45.36	41.56
EES03079	Sorghum	plasma membrane, plastid	43.97	40.69
KXG40330	Sorghum	cytosol	42.79	40.1
KXG29910	Sorghum	cytosol	42.07	37.8
KXG40423	Sorghum	mitochondrion	29.22	36.86
CDY37214	Canola	cytosol, mitochondrion, nucleus, plastid	0.39	6.86
KRH46035	Soybean	cytosol, plastid	0.06	1.41

Protein Annotations

KEGG:00500+2.4.1.34	MapMan:21.7.1	UniProt:A0A1B6Q644	InterPro:FKS1-like_dom1	GO:GO:0000148	GO:GO:0003674
GO:GO:0003824	GO:GO:0003843	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975
GO:GO:0006075	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_48	EnsemblPlants:KXG33388	ProteinID:KXG33388	ProteinID:KXG33388.1
ProteinID:KXG33389.1	PFAM:PF02364	PFAM:PF14288	PANTHER:PTHR12741	PANTHER:PTHR12741:SF23	MetaCyc:PWY-6773
SMART:SM01205	EnsemblPlantsGene:SORBI_3003G298900	TMHMM:TMhelix	UniParc:UPI00081AE94B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:63012095..63019242

Molecular Weight (calculated)

207661.0 Da

IEP (calculated)

9.454

GRAVY (calculated)

-0.031

Length

1790 amino acids

Sequence
(BLAST)

0001: MSLLRNRRTA AAAAAAGGGG GNPEPAAYNI IPIHDVVMHG DHPSLRFPEV RAAVEALAHA ADLPPPPLAR AWDAFRADLF DWLGATFGFQ LHNVRNQREH
0101: LVLLLANAQL RKGGTLPTDH PADVLHHSVA RDIRRKLLKN YKAWCSYLGK RPHVHVPPSG GRRVAQGVGL DTRRDLLYTA LYLLIWGEAA NLRFMPECLC
0201: YIFHYMALDL NHVIDQSIDI ETGRLSIPAV HGEDAFLEKV VKPIYDVLKA EVKFSRDGTK PHSAWRNYDD VNEYFWSRRV FRRLQWPLSP ARSFFIPPGN
0301: PGRIGKTGFV EQRSFWNVYR SFDRVWVMLI LFFQAAMIVA WDGRTPWNSL RYRDIQVRVL SVFITWAALR IVQAVLDAGT QYSLVRRDTV LLAVRMVLKV
0401: LVAVGWTITF IVLYVRMWDQ RWRDRRWSFS ANSRVLNYLE AAGVFLIPQV LALVLFIVPW IRNFLEKTNW RILYVLTWWF QTRTFVGRGV REGLIDNIKY
0501: TTFWVCLLTA KFGFSYFLQI RPMVEPTKTI LSLHDIKRNW FEFMPHTERI AIIFLWAPVV LIYLMDIQIW YAIFSSLTGA LIGLFSHLGE IRSVEQLRLR
0601: FQFFASAMQF NLMPEEHLDA VRGGLRSKLY DAINRIKLRY GFGRPYRKIE ANEVEAKRFA LIWNEIIQTF REEDIISDKE VELLELPPVV WKIRVVRWPC
0701: FLLNNELLLA LGQAKELVAD DRAHWTRICK NEYRRCAVIE AYDSIRHLLL EIIEDRTVEH IIFSQLFFAF DAAMENGKFS EEYKLELLPE IHSSVITLVE
0801: LLLKEKKDQT KIVNTLQTLY VFAIHDFPKN KKDMEQLRQE RLAPPTLEES RLLFEDVIKC PNNDDVSFYK QVRRLHTILT SRDSMNNVPK NPEARRRITF
0901: FSNSLFMNMP RAPTVEKMMA FSVLTPYYNE DVMYNKDQLH RENEDGVSIL FYLQKIYEDD WGNFLERMQR EGMTDDNEIW GNKYQELRLW ASYRGQTLAR
1001: TVRGMMYYHR ALKMLAFLDT ASEVDITEGT KHLASFGSIR HENDVYPMNG GFRQQPQRRL DRGTSTVSQL FKGQEDGAAL MKYTYVVTCQ IYGKQKIAKD
1101: QRAEDILSLM RKNEALRVAY VDEVHHQGYT QYYSVLVKFD QGLQREVEIY RIRLPGELKL GEGKPENQNH AIIFTRGDAV QTIDMNQDNY FEEALKMRNL
1201: LEQYNYYHGS RKPTLLGVRE HVFTGSVSSL AWFMSAQETS FVTLGQRVLA NPLKVRMHYG HPDVFDRLWF LTRGGISKAS RVINISEDIF AGFNCTLRGG
1301: NVSHHEYIQV GKGRDVGLNQ ISMFEAKVSS GNGEQTLSRD VYRLGHRLDF FRMLSVFYTT VGFYFNTMLV VLTVYTFVWG RLYLALSGLE AGIQGSANST
1401: NNKALGTVLN QQFIIQLGFF TALPMIIENS LEQGFLPAIW DFFTMQMNFS SVFYTFSMGT KSHYYGRTIL HGGAKYRATG RGFVVQHKSF AENYRLYARS
1501: HFIKAIELGI ILTVYAAHSV IAKNTLVYII MNISSWFLVV SWIMAPFAFN PSGFDWLKTV YDFDDFMNWI WYPGGLFSKP EQSWEVWWFE EQDHLRTTGL
1601: WGKILEILLD LRYFFFQYGV VYQLKIANNS RSIAVYLLSW ICVAVIFGVF VLMSYARDKY AAKEHLYYRV VQTVVIVLAV LVLILFLKFT EFEIIDIFTS
1701: LLAFIPTGWG LISIAQVIRP FIESTVVWNS IISVARLYEI LLGAFIMAPV ALLSWLPGFQ EMQTRVLFNE GFSRGLQISR ILTGKKTNTV

Best Arabidopsis Sequence Match ( AT4G03550.1 )
(BLAST)

0001: MSLRHRTVPP QTGRPLAAEA VGIEEEPYNI IPVNNLLADH PSLRFPEVRA AAAALKTVGD LRRPPYVQWR SHYDLLDWLA LFFGFQKDNV RNQREHMVLH
0101: LANAQMRLSP PPDNIDSLDS AVVRRFRRKL LANYSSWCSY LGKKSNIWIS DRNPDSRREL LYVGLYLLIW GEAANLRFMP ECICYIFHNM ASELNKILED
0201: CLDENTGQPY LPSLSGENAF LTGVVKPIYD TIQAEIDESK NGTVAHCKWR NYDDINEYFW TDRCFSKLKW PLDLGSNFFK SRGKSVGKTG FVERRTFFYL
0301: YRSFDRLWVM LALFLQAAII VAWEEKPDTS SVTRQLWNAL KARDVQVRLL TVFLTWSGMR LLQAVLDAAS QYPLVSRETK RHFFRMLMKV IAAAVWIVAF
0401: TVLYTNIWKQ KRQDRQWSNA ATTKIYQFLY AVGAFLVPEI LALALFIIPW MRNFLEETNW KIFFALTWWF QGKSFVGRGL REGLVDNIKY STFWIFVLAT
0501: KFTFSYFLQV KPMIKPSKLL WNLKDVDYEW HQFYGDSNRF SVALLWLPVV LIYLMDIQIW YAIYSSIVGA VVGLFDHLGE IRDMGQLRLR FQFFASAIQF
0601: NLMPEEQLLN ARGFGNKFKD GIHRLKLRYG FGRPFKKLES NQVEANKFAL IWNEIILAFR EEDIVSDREV ELLELPKNSW DVTVIRWPCF LLCNELLLAL
0701: SQARELIDAP DKWLWHKICK NEYRRCAVVE AYDSIKHLLL SIIKVDTEEH SIITVFFQII NQSIQSEQFT KTFRVDLLPK IYETLQKLVG LVNDEETDSG
0801: RVVNVLQSLY EIATRQFFIE KKTTEQLSNE GLTPRDPASK LLFQNAIRLP DASNEDFYRQ VRRLHTILTS RDSMHSVPVN LEARRRIAFF SNSLFMNMPH
0901: APQVEKMMAF SVLTPYYSEE VVYSKEQLRN ETEDGISTLY YLQTIYADEW KNFKERMHRE GIKTDSELWT TKLRDLRLWA SYRGQTLART VRGMMYYYRA
1001: LKMLAFLDSA SEMDIREGAQ ELGSVRNLQG ELGGQSDGFV SENDRSSLSR ASSSVSTLYK GHEYGTALMK FTYVVACQIY GSQKAKKEPQ AEEILYLMKQ
1101: NEALRIAYVD EVPAGRGETD YYSVLVKYDH QLEKEVEIFR VKLPGPVKLG EGKPENQNHA MIFTRGDAVQ TIDMNQDSYF EEALKMRNLL QEYNHYHGIR
1201: KPTILGVREH IFTGSVSSLA WFMSAQETSF VTLGQRVLAN PLKVRMHYGH PDVFDRFWFL SRGGISKASR VINISEDIFA GFNCTLRGGN VTHHEYIQVG
1301: KGRDVGLNQI SMFEAKVASG NGEQVLSRDV YRLGHRLDFF RMLSFFYTTV GFFFNTMMVI LTVYAFLWGR VYLALSGVEK SALADSTDTN AALGVILNQQ
1401: FIIQLGLFTA LPMIVEWSLE EGFLLAIWNF IRMQIQLSAV FYTFSMGTRA HYFGRTILHG GAKYRATGRG FVVEHKGFTE NYRLYARSHF VKAIELGLIL
1501: IVYASHSPIA KDSLIYIAMT ITSWFLVISW IMAPFVFNPS GFDWLKTVYD FEDFMNWIWY QGRISTKSEQ SWEKWWYEEQ DHLRNTGKAG LFVEIILVLR
1601: FFFFQYGIVY QLKIANGSTS LFVYLFSWIY IFAIFVLFLV IQYARDKYSA KAHIRYRLVQ FLLIVLAILV IVALLEFTHF SFIDIFTSLL AFIPTGWGIL
1701: LIAQTQRKWL KNYTIFWNAV VSVARMYDIL FGILIMVPVA FLSWMPGFQS MQTRILFNEA FSRGLRIMQI VTGKKSKGDV

Arabidopsis Description

CALS12Callose synthase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT82]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.