CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018565_P002	Maize	cytosol	33.15	99.54
Zm00001d018562_P003	Maize	golgi	28.89	95.59
Os02t0832500-01	Rice	plasma membrane	14.86	93.25
Os02t0832400-02	Rice	nucleus, peroxisome, plasma membrane, plastid	43.7	90.65
HORVU6Hr1G095090.22	Barley	plastid	89.5	89.0
TraesCS6D01G405600.1	Wheat	plastid	89.29	88.52
TraesCS6B01G468200.1	Wheat	golgi, unclear	89.34	88.48
TraesCS6A01G420100.1	Wheat	plastid	88.88	87.85
Zm00001d018560_P002	Maize	plastid	26.79	86.45
EER90434	Sorghum	plastid	85.35	84.78
PGSC0003DMT400074555	Potato	plasma membrane	18.55	78.87
VIT_06s0004g01270.t01	Wine grape	cytosol, mitochondrion, nucleus, plasma membrane	77.51	77.04
KRH46871	Soybean	mitochondrion	77.0	76.76
Bra023386.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	76.74	76.7
KRH01816	Soybean	cytosol	76.84	76.61
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	76.64	76.6
AT5G13000.1	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	76.59	76.47
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	76.54	76.46
CDX69678	Canola	cytosol	76.54	76.38
PGSC0003DMT400082011	Potato	mitochondrion	76.18	76.33
CDX97217	Canola	cytosol	76.49	76.33
Solyc01g006370.2.1	Tomato	nucleus	76.13	76.28
Bra008864.1-P	Field mustard	cytosol, plastid	74.49	75.34
Solyc01g073750.2.1	Tomato	nucleus	68.9	74.81
VIT_13s0156g00210.t01	Wine grape	mitochondrion	74.08	74.31
CDY42084	Canola	cytosol, nucleus, plasma membrane	72.69	73.91
AT2G31960.3	Thale cress	cytosol	73.62	73.69
AT1G05570.1	Thale cress	cytosol, mitochondrion, plasma membrane	73.62	73.69
CDY12242	Canola	mitochondrion	72.85	73.45
KRH43561	Soybean	mitochondrion	73.1	73.29
KRH13867	Soybean	mitochondrion	72.95	73.1
Bra005624.1-P	Field mustard	cytosol, nucleus, plasma membrane	73.16	73.04
OQU93328	Sorghum	mitochondrion	73.1	73.03
Bra015436.1-P	Field mustard	mitochondrion	72.49	73.01
CDY10125	Canola	mitochondrion	72.13	72.5
CDY47273	Canola	plasma membrane	62.65	72.37
CDY67378	Canola	cytosol	15.83	66.03
KRG93040	Soybean	plasma membrane	26.95	64.7
CDY12248	Canola	cytosol	4.92	64.43
Bra005620.1-P	Field mustard	cytosol	15.47	64.39
CDY42080	Canola	cytosol	15.42	64.18
OQU75971	Sorghum	cytosol	60.4	61.89
AT5G36870.1	Thale cress	cytosol, mitochondrion, plasma membrane	59.07	61.62
CDX72782	Canola	cytosol	3.12	59.22
OQU93478	Sorghum	plasma membrane	8.81	57.53
EES03079	Sorghum	plasma membrane, plastid	54.82	55.33
EES03083	Sorghum	cytosol	49.9	52.96
KXG29910	Sorghum	cytosol	52.46	51.41
KXG33086	Sorghum	cytosol	42.57	46.71
KXG33388	Sorghum	mitochondrion	41.96	45.75
KXG40330	Sorghum	cytosol	42.98	43.93
KXG40423	Sorghum	mitochondrion	29.66	40.8

Protein Annotations

KEGG:00500+2.4.1.34	Gene3D:1.25.40.270	MapMan:21.7.1	UniProt:A0A1Z5RQI0	ncoils:Coil	InterPro:FKS1-like_dom1
GO:GO:0000148	GO:GO:0003674	GO:GO:0003824	GO:GO:0003843	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005975	GO:GO:0006075	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_48	InterPro:IPR023175
EnsemblPlants:OQU86033	ProteinID:OQU86033	ProteinID:OQU86033.1	PFAM:PF02364	PFAM:PF04652	PFAM:PF14288
PANTHER:PTHR12741	PANTHER:PTHR12741:SF17	SMART:SM01205	EnsemblPlantsGene:SORBI_3004G358400	TMHMM:TMhelix	UniParc:UPI000B424E66
InterPro:VPS_Vta1/CALS_N	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:68499526..68523996

Molecular Weight (calculated)

225028.0 Da

IEP (calculated)

9.450

GRAVY (calculated)

-0.112

Length

1952 amino acids

Sequence
(BLAST)

0001: MASSSGGGGG RRLAPGGDAS PASAGARRIY RTQTAGNLGD SIFDSEVVPS SLVEIAPILR VANEVEASNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK
0101: TALLQRLERE NDPTLKGRVK QSDAREMQSF YQHYYKKYIQ ALQNAADKAD RAQLTKAYQT AAVLFEVLKA VNVSQKIEVD QSILETHNQV EEKKKLYLPY
0201: NILPLDPDSA NQAIMRYPEI QAAFHALRNT RGLPWPKEHD KKPDADLLAW LQAMFGFQKD NVSNQREHLI LLLANVHIRQ IPKPEQQPKL DDRALDTVMK
0301: KLFKNYKRWC KYLGRKSSLW LPTIQQEVQQ RKLLYMGLYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPTTG ENVKPAYGGE EEAFLKRVVT
0401: PIYKVIEKEV ERSKTMKSKH SHWRNYDDLN EYFWSRDCFR LGWPMRSDAD FFKTPNVSLH HLDGEDRPVG NGNWMGKVNF VEIRSFWHIF RSFDRMWSFL
0501: ILSLQAMIII AWNGGTPSDI FDRGVFKQVL SIFITAAILK LGQAILDIIL SWKARRNMSL VVKLRYILKL LSAAAWVVIL PVTYAYTWEN PTGLARTIKS
0601: WLGDGQNQPS LYILAVVIYL APNLLSATLF LFPVIRRALE RSNLRVVTFI MWWSQPRLFV GRGMHEGAFS LFKYTMFWVL LLATKLVVSF YVEIKPLVQP
0701: TKDIMKEPIR TFKWHEFFPH ANNNIGVVIA LWAPIILVYF MDTQIWYAIF STLIGGVYGA CRRLGEIRTL GMLRSRFESL PKAFNQCLIP SDTSKRRGFR
0801: AAFSKPSKTP EDTKEEEKIA ARFAQIWNLI ITSFREEDLI DDREKDLLLV PYCKDRDMDI IQWPPFLLAS KIPIALDMAA DSGGKDRDLK KRMKSDPYFT
0901: YAIKECYASF KNIIYALVIS SRERGFIQKI FDMVDEHITE ETLIKELNMS NLPTLSKKFI ELLDLLESNN KEEQGQVIIL FQDMLEVVTR DIMVDQLSDL
1001: LESIHGPNNK RSEGMMPLDQ QVQLFTKAID FPVKKTQAWN EKIKRLRLLL TVKESAMDVP TNLDARRRIS FFANSLFMSM PDAPKVRQML PFSVLTPYYK
1101: EDVLFSSQAL GEQNEDGVSI LFYLQKIYPD EWKNFLERVH CESEDQLHET EQSEEQLRLW ASYRGQTLTR TVRGMMYYRQ ALVLQAFLDM ARDDDLMEGF
1201: RAADLLSESD ESQLLTQCKA IADMKFTYVV SCQQYGIQKR SGDPHAQDIL RLMTTYPSLR VAYIDEVEEP SKDRNKKIEK VYYSALVKAA VTKPDDPGQK
1301: LDQDIYRIKL PGNAMLGEGK PENQNHAIIF TRGEGLQTID MNQEHYMEET LKMRNLLQEF LKKHDGVRYP SILGVREHIF TGSVSSLAWF MSNQETSFVT
1401: IGQRVLANPL RVRFHYGHPD IFDRLFHLTR GGVSKASKII NLSEDIFAGF NSTLREGNVT HHEYMQVGKG RDVGLNQISL FEAKIANGNG EQTLSRDVYR
1501: LGHRFDFFRM LSCYYTTIGF YFSTMITVWT VYVFLYGRLY LVLSGLDEAL ATGKRFIHNE PLQVALASQS FVQLGFLMAL PMMMEIGLER GFRTALSDFV
1601: LMQLQLASVF FTFSLGTKTH YYGTTLLHGG AEYRATGRGF VVFHAKFAEN YRLYSRSHFV KGIELMILLI VYEIFGQSYR GAIAYIFITI SMWFMVVTWL
1701: FAPFLFNPSG FEWQKIVDDW TDWNKWISNR GGIGVPPEKS WESWWEKEQE PLRHSGKRGT VLEIVLALRF FIYQYGLVYH LNITTHTKSV LVYCISWVII
1801: FVILLVMKTV SVGRRKFSAE FQLVFRLIKG LIFITFISII IILIAIPHMT VQDIFVCILA FMPTGWGLLL IAQTMRSAIS HMGLWGSVKA LARGYEIIMG
1901: LLLFTPIAFL AWFPFVSEFQ TRMLFNQAFS RGLQISRILG GHKKDRAARN KE

Best Arabidopsis Sequence Match ( AT5G13000.1 )
(BLAST)

0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTV RGMMYYRKAL ELQAFLDMAM HEDLMEGYKA
1201: VELNSENNSR GERSLWAQCQ AVADMKFTYV VSCQQYGIHK RSGDPRAQDI LRLMTRYPSL RVAYIDEVEE PVKDKSKKGN QKVYYSVLVK VPKSTDHSTL
1301: AQNLDQVIYR IRLPGPAILG EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS
1401: FVTIGQRLLA NPLRVRFHYG HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD
1501: IYRLGHRFDF FRMMSCYFTT VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS
1601: EFVLMQLQLA PVFFTFSLGT KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG
1701: TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW
1801: LVIFLILFVM KTVSVGRRRF SASFQLMFRL IKGLIFMTFI AIIVILITLA HMTIQDIIVC ILAFMPTGWG MLLIAQACKP VVHRAGFWGS VRTLARGYEI
1901: VMGLLLFTPV AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHRKDRS SRNKE

Arabidopsis Description

CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.