CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72782	Canola	cytosol	36.91	53.4
CDY37214	Canola	cytosol, mitochondrion, nucleus, plastid	32.21	47.06
Os06t0728902-01	Rice	plastid	57.72	44.79
CDY38027	Canola	cytosol	59.06	44.44
CDY01570	Canola	cytosol	59.06	44.44
CDY72646	Canola	cytosol	59.06	44.44
CDX86961	Canola	cytosol	59.06	44.44
CDY42081	Canola	cytosol	59.73	32.96
CDY67195	Canola	cytosol	59.06	32.84
Zm00001d027475_P001	Maize	mitochondrion, plastid	60.4	29.13
CDY12867	Canola	cytosol	55.7	26.52
CDY42080	Canola	cytosol	71.81	22.81
CDY67378	Canola	cytosol	71.14	22.65
Os03t0128200-01	Rice	mitochondrion	63.09	17.44
Zm00001d018560_P002	Maize	plastid	61.74	15.21
KRG93040	Soybean	plasma membrane	57.05	10.46
Os02t0832400-02	Rice	nucleus, peroxisome, plasma membrane, plastid	62.42	9.88
Zm00001d014867_P001	Maize	plastid	59.06	8.0
Solyc01g073750.2.1	Tomato	nucleus	64.43	5.34
CDY42084	Canola	cytosol, nucleus, plasma membrane	68.46	5.31
CDY67918	Canola	cytosol, nucleus, plasma membrane	33.56	5.27
CDY12242	Canola	mitochondrion	68.46	5.27
CDY10125	Canola	mitochondrion	65.1	4.99
OQU86033	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	64.43	4.92
TraesCS4B01G321300.2	Wheat	mitochondrion	63.09	4.83
TraesCS5A01G490800.2	Wheat	mitochondrion	63.09	4.83
TraesCS6D01G405600.1	Wheat	plastid	63.76	4.82
TraesCS6B01G468200.1	Wheat	golgi, unclear	63.76	4.82
TraesCS4D01G317900.5	Wheat	mitochondrion	63.09	4.81
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	63.09	4.81
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	63.09	4.81
TraesCS6A01G420100.1	Wheat	plastid	63.76	4.81
CDX97217	Canola	cytosol	63.09	4.81
CDX69678	Canola	cytosol	63.09	4.81
Zm00001d027472_P002	Maize	mitochondrion	62.42	4.78
OQU93328	Sorghum	mitochondrion	62.42	4.76
TraesCS7A01G555700.1	Wheat	plastid	62.42	4.74
TraesCS7B01G480300.1	Wheat	plastid	62.42	4.74
TraesCS7D01G554900.1	Wheat	plastid	62.42	4.73
Zm00001d036351_P098	Maize	plastid	61.74	4.69
EER90434	Sorghum	plastid	61.74	4.68
CDY10203	Canola	plasma membrane	43.62	4.14
CDX81451	Canola	cytosol, plastid	52.35	4.04
CDX67777	Canola	cytosol	47.65	3.67
CDY06644	Canola	cytosol	44.3	3.44
CDY06215	Canola	cytosol	44.3	3.17
CDY09971	Canola	cytosol	44.3	3.11
CDX98348	Canola	cytosol, golgi, plasma membrane	47.65	3.08
CDY24642	Canola	cytosol	34.9	2.72
CDY08011	Canola	cytosol	34.23	2.68
CDX98473	Canola	cytosol	34.9	2.67
CDX74058	Canola	mitochondrion	34.23	2.61
CDY33198	Canola	cytosol, mitochondrion	30.2	2.38
CDX75010	Canola	cytosol, mitochondrion	30.2	2.36
CDY34913	Canola	cytosol	28.86	2.27
CDY47436	Canola	extracellular	0.67	1.47
CDX71163	Canola	cytosol, extracellular, plasma membrane	0.67	1.23
Os06t0728800-01	Rice	plasma membrane	1.34	0.72
Os02t0832500-01	Rice	plasma membrane	1.34	0.64
Zm00001d014866_P002	Maize	cytosol, extracellular	0.67	0.57
CDY47126	Canola	plasma membrane	0.67	0.53
CDY16627	Canola	cytosol	2.01	0.5
CDY44742	Canola	cytosol	2.01	0.5
CDY47273	Canola	plasma membrane	5.37	0.47
CDY67747	Canola	mitochondrion	2.01	0.47
CDY16628	Canola	cytosol, nucleus, plasma membrane	3.36	0.45
CDY44741	Canola	cytosol, nucleus, plasma membrane	3.36	0.45
CDY10204	Canola	plasma membrane	0.67	0.35
CDY21974	Canola	plasma membrane	4.03	0.34
CDY48567	Canola	plasma membrane	4.03	0.34
Zm00001d014865_P001	Maize	cytosol	1.34	0.33
Zm00001d018565_P002	Maize	cytosol	1.34	0.31
CDY37215	Canola	plasma membrane	1.34	0.28
PGSC0003DMT400074555	Potato	plasma membrane	0.67	0.22
CDY05323	Canola	golgi, plasma membrane	1.34	0.17
Os03t0128100-01	Rice	cytosol, plasma membrane	0.67	0.16
Zm00001d018562_P003	Maize	golgi	0.0	0.0

Protein Annotations

EnsemblPlants:CDY12248	EnsemblPlantsGene:GSBRNA2T00061291001	Gene3D:1.25.40.270	GO:A0A078FJG1	InterPro:IPR023175	InterPro:VPS_Vta1/CALS_N
KEGG:00500+2.4.1.34	MetaCyc:PWY-6773	ncoils:Coil	PANTHER:PTHR12741	PANTHER:PTHR12741:SF17	PFAM:PF04652
ProteinID:CDY12248	ProteinID:CDY12248.1	UniParc:UPI0004EC5C16	UniProt:A0A078FJG1	MapMan:35.1	:

Description

BnaC04g12780DBnaC04g12780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJG1]

Coordinates

chrLK032018:-:853475..854946

Molecular Weight (calculated)

17197.9 Da

IEP (calculated)

7.411

GRAVY (calculated)

-0.056

Length

149 amino acids

Sequence
(BLAST)

001: MLDSEVVPSS LVEIARILRV ANEVEASNPR VAYLCRFYAF GEACKLDPTS SGRGVRQFKT ALLQRLEQEN ETTLARRQKS DDAREMQTFY QHYYNTSIQT
101: LLAKLIVLNL KRHIKLTLFL FEVLKSVNVE MADEVKLIVD YVFVESLTF

Best Arabidopsis Sequence Match ( AT1G05570.1 )
(BLAST)

0001: MAQRREPDPP PPQRRILRTQ TVGSLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALLN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL ETHNKVEEKT QIYVPYNILP LDPDSQNQAI
0201: MRLPEIQAAV AALRNTRGLP WTAGHKKKLD EDILDWLQSM FGFQKDNVLN QREHLILLLA NVHIRQFPKP DQQPKLDDRA LTIVMKKLFR NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYQ TISKEAKRSR
0401: GGKSKHSVWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLERS EIKSNSGDRW MGKVNFVEIR SFWHIFRSFD RLWSFYILCL QAMIVIAWNG
0501: SGELSAIFQG DVFLKVLSVF ITAAILKLAQ AVLDIALSWK ARHSMSLYVK LRYVMKVGAA AVWVVVMAVT YAYSWKNASG FSQTIKNWFG GHSHNSPSLF
0601: IVAILIYLSP NMLSALLFLF PFIRRYLERS DYKIMMLMMW WSQPRLYIGR GMHESALSLF KYTMFWIVLL ISKLAFSYYA EIKPLVGPTK DIMRIHISVY
0701: SWHEFFPHAK NNLGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSIPG AFNDCLVPQD NSDDTKKKRF RATFSRKFDQ
0801: LPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWSDPDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELKK RLAVDSYMTC AVRECYASFK
0901: NLINYLVVGE REGQVINDIF SKIDEHIEKE TLITELNLSA LPDLYGQFVR LIEYLLENRE EDKDQIVIVL LNMLELVTRD IMEEEVPSLL ETAHNGSYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMDMP PAPKIRNMLS FSVLTPYFSE DVLFSIFGLE
1101: QQNEDGVSIL FYLQKIFPDE WTNFLERVKC GNEEELRARE DLEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELLKGYK ALELTSEEAS
1201: KSGGSLWAQC QALADMKFTF VVSCQQYSIH KRSGDQRAKD ILRLMTTYPS IRVAYIDEVE QTHKESYKGT EEKIYYSALV KAAPQTKPMD SSESVQTLDQ
1301: LIYRIKLPGP AILGEGKPEN QNHAIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLEK HGGVRCPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDIFD RLFHLTRGGI CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSSQ RAFRNNKPLE AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIEFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGQSYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKELEHLR HSGVRGITLE IFLALRFFIF QYGLVYHLST FKGKNQSFWV YGASWFVILF
1801: ILLIVKGLGV GRRRFSTNFQ LLFRIIKGLV FLTFVAILIT FLALPLITIK DLFICMLAFM PTGWGMLLIA QACKPLIQQL GIWSSVRTLA RGYEIVMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE

Arabidopsis Description

CALS1Callose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9AUE0]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.