CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47436	Canola	extracellular	15.38	64.71
CDX71163	Canola	cytosol, extracellular, plasma membrane	15.73	55.56
HORVU3Hr1G042540.3	Barley	cytosol, mitochondrion	73.08	36.8
Os01t0533000-00	Rice	cytosol, plasma membrane	72.03	31.84
Os01t0533500-01	Rice	plasma membrane	61.89	31.61
TraesCS3A01G197600.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	61.19	26.84
CDY37215	Canola	plasma membrane	58.39	23.76
CDY44742	Canola	cytosol	42.31	20.1
CDY16627	Canola	cytosol	42.31	20.1
GSMUA_Achr1P05550_001	Banana	endoplasmic reticulum, golgi, plasma membrane	77.27	17.16
CDY67747	Canola	mitochondrion	38.46	17.08
CDY06644	Canola	cytosol	100.0	14.89
Bra015504.1-P	Field mustard	cytosol	99.3	14.78
CDY47126	Canola	plasma membrane	9.09	13.76
AT1G06490.1	Thale cress	cytosol	90.56	13.23
VIT_12s0028g00400.t01	Wine grape	plasma membrane	77.27	12.77
CDY09971	Canola	cytosol	94.41	12.74
CDY06215	Canola	cytosol	89.51	12.28
CDX67777	Canola	cytosol	79.72	11.77
CDY05323	Canola	golgi, plasma membrane	46.85	11.15
TraesCS6B01G001900.1	Wheat	cytosol	67.13	11.14
KRG98933	Soybean	cytosol, plastid	74.48	11.11
TraesCS3A01G202000.1	Wheat	cytosol	73.08	10.88
TraesCS3B01G229700.1	Wheat	cytosol, plastid	73.08	10.88
TraesCS3D01G201500.1	Wheat	cytosol	73.08	10.88
EES03079	Sorghum	plasma membrane, plastid	70.28	10.39
Zm00001d044584_P006	Maize	plastid	68.88	10.22
TraesCSU01G021500.1	Wheat	plastid	69.58	10.18
TraesCS2D01G600000.1	Wheat	plastid	69.58	10.17
TraesCS2A01G586600.1	Wheat	plastid	69.23	10.12
CDX98348	Canola	cytosol, golgi, plasma membrane	79.72	9.9
KRH46028	Soybean	cytosol	64.34	9.86
CDY47273	Canola	plasma membrane	58.04	9.82
EES03083	Sorghum	cytosol	62.59	9.73
KRG98945	Soybean	cytosol	66.43	9.7
TraesCS3B01G230100.1	Wheat	mitochondrion	61.89	9.33
TraesCS5D01G111000.2	Wheat	mitochondrion	61.54	9.29
HORVU3Hr1G058470.35	Barley	mitochondrion	61.19	9.28
Zm00001d044566_P006	Maize	cytosol	61.54	9.25
TraesCS6B01G002100.1	Wheat	cytosol	54.9	8.99
CDX81451	Canola	cytosol, plastid	58.39	8.64
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	58.04	8.5
CDY10125	Canola	mitochondrion	57.34	8.44
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	57.69	8.44
CDX97217	Canola	cytosol	57.69	8.44
CDX69678	Canola	cytosol	57.69	8.44
CDY42084	Canola	cytosol, nucleus, plasma membrane	55.94	8.33
CDY12242	Canola	mitochondrion	55.94	8.26
HORVU2Hr1G118600.49	Barley	mitochondrion	52.1	7.81
CDY33198	Canola	cytosol, mitochondrion	48.25	7.29
CDX75010	Canola	cytosol, mitochondrion	47.9	7.18
CDX98473	Canola	cytosol	48.6	7.12
CDY08011	Canola	cytosol	47.2	7.1
CDY24642	Canola	cytosol	46.5	6.97
CDX74058	Canola	mitochondrion	46.85	6.86
CDY21974	Canola	plasma membrane	42.66	6.84
CDY48567	Canola	plasma membrane	42.31	6.79
CDY34913	Canola	cytosol	38.11	5.76
CDY67378	Canola	cytosol	2.1	1.28
CDY42080	Canola	cytosol	1.75	1.07
CDY12248	Canola	cytosol	0.35	0.67
Zm00001d030559_P001	Maize	mitochondrion	1.05	0.4
CDY44741	Canola	cytosol, nucleus, plasma membrane	0.35	0.09
CDY16628	Canola	cytosol, nucleus, plasma membrane	0.35	0.09
CDY10203	Canola	plasma membrane	0.35	0.06
Zm00001d028611_P001	Maize	plastid	0.0	0.0
CDY01570	Canola	cytosol	0.0	0.0
CDY12867	Canola	cytosol	0.0	0.0
CDX86961	Canola	cytosol	0.0	0.0
CDY37214	Canola	cytosol, mitochondrion, nucleus, plastid	0.0	0.0
TraesCS3A01G197500.1	Wheat	mitochondrion	0.0	0.0
CDY38027	Canola	cytosol	0.0	0.0
CDY42081	Canola	cytosol	0.0	0.0
Os01t0533100-00	Rice	mitochondrion, plastid	0.0	0.0
CDY67195	Canola	cytosol	0.0	0.0
CDY67918	Canola	cytosol, nucleus, plasma membrane	0.0	0.0
HORVU3Hr1G042600.9	Barley	cytosol, plastid	0.0	0.0
CDX72782	Canola	cytosol	0.0	0.0
CDY72646	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.34	MapMan:50.2.4	GO:A0A078FAZ5	UniProt:A0A078FAZ5	EnsemblPlants:CDY10204	ProteinID:CDY10204
ProteinID:CDY10204.1	GO:GO:0000148	GO:GO:0003674	GO:GO:0003824	GO:GO:0003843	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0006075	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00032023001
InterPro:Glyco_trans_48	PFAM:PF02364	PANTHER:PTHR12741	PANTHER:PTHR12741:SF16	MetaCyc:PWY-6773	TMHMM:TMhelix
UniParc:UPI0004EE34F0	SEG:seg	:	:	:	:

Description

BnaC05g04470DBnaC05g04470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAZ5]

Coordinates

chrLK032001:+:539745..540996

Molecular Weight (calculated)

32925.8 Da

IEP (calculated)

9.832

GRAVY (calculated)

0.468

Length

286 amino acids

Sequence
(BLAST)

001: MLLIVYQVYG NSYRSSSLYI YITFSMWFLV TSWLFAPFIF NPSGFEWQKT VDDWTDWKRW MGNRGGIGIV VEKSWESWWE SEQEHLKHTN LRGRVLEILL
101: ALRFLLYQYG IVYHLNVAHR DTTILVYGLS WGVLLAVLLV LKMVSMGRRK FGTDFQVMFR ILKALLFLGF LSVMTVLFVV CGLTIADVCA SFLAFLPTGW
201: AILLIGQALR GVLKGLGFWD SIKELGRAYE YIMGLSIFTP IAVLSWFPFV SEFQTRLLFN QAFSRGLQIS MILAGKKDKE TPAPSK

Best Arabidopsis Sequence Match ( AT1G05570.3 )
(BLAST)

0001: MAQRREPDPP PPQRRILRTQ TVGSLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALLN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL ETHNKVEEKT QIYVPYNILP LDPDSQNQAI
0201: MRLPEIQAAV AALRNTRGLP WTAGHKKKLD EDILDWLQSM FGFQKDNVLN QREHLILLLA NVHIRQFPKP DQQPKLDDRA LTIVMKKLFR NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYQ TISKEAKRSR
0401: GGKSKHSVWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLERS EIKSNSGDRW MGKVNFVEIR SFWHIFRSFD RLWSFYILCL QAMIVIAWNG
0501: SGELSAIFQG DVFLKVLSVF ITAAILKLAQ AVLDIALSWK ARHSMSLYVK LRYVMKVGAA AVWVVVMAVT YAYSWKNASG FSQTIKNWFG GHSHNSPSLF
0601: IVAILIYLSP NMLSALLFLF PFIRRYLERS DYKIMMLMMW WSQPRLYIGR GMHESALSLF KYTMFWIVLL ISKLAFSYYA EIKPLVGPTK DIMRIHISVY
0701: SWHEFFPHAK NNLGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSIPG AFNDCLVPQD NSDDTKKKRF RATFSRKFDQ
0801: LPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWSDPDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELKK RLAVDSYMTC AVRECYASFK
0901: NLINYLVVGE REGQVINDIF SKIDEHIEKE TLITELNLSA LPDLYGQFVR LIEYLLENRE EDKDQIVIVL LNMLELVTRD IMEEEVPSLL ETAHNGSYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMDMP PAPKIRNMLS FSVLTPYFSE DVLFSIFGLE
1101: QQNEDGVSIL FYLQKIFPDE WTNFLERVKC GNEEELRARE DLEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELLKGYK ALELTSEEAS
1201: KSGGSLWAQC QALADMKFTF VVSCQQYSIH KRSGDQRAKD ILRLMTTYPS IRVAYIDEVE QTHKESYKGT EEKIYYSALV KAAPQTKPMD SSESVQTLDQ
1301: LIYRIKLPGP AILGEGKPEN QNHAIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLEK HGGVRCPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDIFD RLFHLTRGGI CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSSQ RAFRNNKPLE AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIEFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGQSYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKELEHLR HSGVRGITLE IFLALRFFIF QYGLVYHLST FKGKNQSFWV YGASWFVILF
1801: ILLIVKGLGV GRRRFSTNFQ LLFRIIKGLV FLTFVAILIT FLALPLITIK DLFICMLAFM PTGWGMLLIA QACKPLIQQL GIWSSVRTLA RGYEIVMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE

Arabidopsis Description

CALS1Callose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9AUE0]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.