Factsheet for TraesCS3A01G197600.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 2
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0533500-01	Rice	plasma membrane	71.63	83.39
CDY10204	Canola	plasma membrane	26.84	61.19
TraesCS2A01G493000.1	Wheat	plasma membrane	30.21	44.87
KRH25579	Soybean	golgi, mitochondrion, plasma membrane	21.32	40.52
GSMUA_Achr1P05550_001	Banana	endoplasmic reticulum, golgi, plasma membrane	68.1	34.47
TraesCS3B01G230100.1	Wheat	mitochondrion	94.17	32.37
HORVU3Hr1G058470.35	Barley	mitochondrion	92.94	32.15
TraesCS5D01G111000.2	Wheat	mitochondrion	93.25	32.08
EES03083	Sorghum	cytosol	85.74	30.4
Zm00001d044566_P006	Maize	cytosol	84.66	29.02
VIT_12s0028g00400.t01	Wine grape	plasma membrane	62.12	23.4
TraesCS3A01G202000.1	Wheat	cytosol	68.86	23.37
TraesCS2A01G586600.1	Wheat	plastid	67.94	22.64
CDY06644	Canola	cytosol	64.88	22.02
Bra015504.1-P	Field mustard	cytosol	64.88	22.02
AT1G06490.1	Thale cress	cytosol	64.88	21.6
AT3G59100.1	Thale cress	cytosol	63.65	21.6
Solyc07g056260.2.1	Tomato	cytosol, plastid	63.04	21.51
CDX67777	Canola	cytosol	62.73	21.12
TraesCS7A01G146200.1	Wheat	cytosol	59.82	20.49
Bra032416.1-P	Field mustard	cytosol	63.8	20.17
CDY06215	Canola	cytosol	64.11	20.06
CDY09971	Canola	cytosol	64.72	19.91
TraesCS5A01G490800.2	Wheat	mitochondrion	59.05	19.78
TraesCS6A01G420100.1	Wheat	plastid	59.2	19.54
TraesCS3A01G245500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	45.25	19.45
TraesCS7A01G555700.1	Wheat	plastid	58.13	19.34
TraesCS6A01G154400.1	Wheat	cytosol	54.45	18.21
TraesCS5A01G520600.3	Wheat	cytosol	53.37	18.13
Bra003364.1-P	Field mustard	cytosol, golgi, plasma membrane	62.73	18.08
CDX98348	Canola	cytosol, golgi, plasma membrane	62.58	17.72
TraesCS4A01G459300.1	Wheat	golgi	51.99	17.71
TraesCS7A01G030500.1	Wheat	golgi	51.84	17.64
TraesCS3A01G292700.1	Wheat	cytosol	48.16	17.49
CDY47126	Canola	plasma membrane	4.45	15.34
CDY10203	Canola	plasma membrane	29.45	12.24
TraesCS6A01G419900.1	Wheat	cytosol	1.99	2.65
TraesCS3A01G197500.1	Wheat	mitochondrion	0.31	0.45
KRH25578	Soybean	mitochondrion	0.0	0.0
TraesCS2A01G493100.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.34	MapMan:21.7.1	GO:GO:0000148	GO:GO:0003674	GO:GO:0003824	GO:GO:0003843
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0006075	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_48
PFAM:PF02364	PANTHER:PTHR12741	PANTHER:PTHR12741:SF13	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G197600	EnsemblPlants:TraesCS3A01G197600.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:308701135..308708799

Molecular Weight (calculated)

75077.8 Da

IEP (calculated)

9.388

GRAVY (calculated)

0.293

Length

652 amino acids

Sequence
(BLAST)

001: MDDIRIWASY RGQTLARTVR GMMYYRRALE VQCYEDMKSE QGLRKSWREI PCSCRVFSFE EGGGGELDRL PIWLFMPKFE VPHRVRFHYG HPDVFDRIFH
101: ITRGGISKAS KVINLSEDIF AGFNSTLRQG TVTHHEYIQL GKGRDVGMNQ ISNFEAKVAN GNGEQTLCRD VYRLGHRFDF YRMLSMYFTT VGLYFNSMVA
201: VLTVYVFLYG RLYLVLSGLE KSILHDPRIK NIKPFENALA TQSVFQLGTL LILPMIMEVG LEKGFGKALA EFIIMQLQLA PMFFTFHLGT KTHYYGRTIL
301: HGGAKYRGTG RGFVVRHAKF AENYRMYSRS HFVKALELLI LLVVYLAYGS SYRSSSLYVY VTISMWFLVF CWLFAPFIFN PSCFEWHKTV DDWTDWWKWM
401: SNRGGIGLAP EQSWEAWWVS EHEHLKNGTI RSLLLELVLS LRLLIYQYGI VYHLHIVHEN KSFMIYALSW LVIGIVLVLL KVVSLGREKF VTKFQLVFRI
501: LKGIVFLVLI GLMVVLFVGF DLAVSDVGAS VLAFIPTVWF ILLMAQVCGP LFRRLVIEPL GVLCCSCCPG GACRGPCCAK LRQSGAVLCK IGPWDSIQEM
601: ARMYEYTMGI LIFLPIAVLS WFPFMSEFQT RLLFNQAFSR GLQISRILAY QA

Best Arabidopsis Sequence Match ( AT1G05570.3 )
(BLAST)

0001: MAQRREPDPP PPQRRILRTQ TVGSLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALLN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL ETHNKVEEKT QIYVPYNILP LDPDSQNQAI
0201: MRLPEIQAAV AALRNTRGLP WTAGHKKKLD EDILDWLQSM FGFQKDNVLN QREHLILLLA NVHIRQFPKP DQQPKLDDRA LTIVMKKLFR NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYQ TISKEAKRSR
0401: GGKSKHSVWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLERS EIKSNSGDRW MGKVNFVEIR SFWHIFRSFD RLWSFYILCL QAMIVIAWNG
0501: SGELSAIFQG DVFLKVLSVF ITAAILKLAQ AVLDIALSWK ARHSMSLYVK LRYVMKVGAA AVWVVVMAVT YAYSWKNASG FSQTIKNWFG GHSHNSPSLF
0601: IVAILIYLSP NMLSALLFLF PFIRRYLERS DYKIMMLMMW WSQPRLYIGR GMHESALSLF KYTMFWIVLL ISKLAFSYYA EIKPLVGPTK DIMRIHISVY
0701: SWHEFFPHAK NNLGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSIPG AFNDCLVPQD NSDDTKKKRF RATFSRKFDQ
0801: LPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWSDPDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELKK RLAVDSYMTC AVRECYASFK
0901: NLINYLVVGE REGQVINDIF SKIDEHIEKE TLITELNLSA LPDLYGQFVR LIEYLLENRE EDKDQIVIVL LNMLELVTRD IMEEEVPSLL ETAHNGSYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMDMP PAPKIRNMLS FSVLTPYFSE DVLFSIFGLE
1101: QQNEDGVSIL FYLQKIFPDE WTNFLERVKC GNEEELRARE DLEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELLKGYK ALELTSEEAS
1201: KSGGSLWAQC QALADMKFTF VVSCQQYSIH KRSGDQRAKD ILRLMTTYPS IRVAYIDEVE QTHKESYKGT EEKIYYSALV KAAPQTKPMD SSESVQTLDQ
1301: LIYRIKLPGP AILGEGKPEN QNHAIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLEK HGGVRCPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDIFD RLFHLTRGGI CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSSQ RAFRNNKPLE AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIEFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGQSYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKELEHLR HSGVRGITLE IFLALRFFIF QYGLVYHLST FKGKNQSFWV YGASWFVILF
1801: ILLIVKGLGV GRRRFSTNFQ LLFRIIKGLV FLTFVAILIT FLALPLITIK DLFICMLAFM PTGWGMLLIA QACKPLIQQL GIWSSVRTLA RGYEIVMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE

Arabidopsis Description

CALS1Callose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9AUE0]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.