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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67777 Canola cytosol 81.02 96.33
AT3G59100.1 Thale cress cytosol 76.12 91.25
CDY10204 Canola plasma membrane 9.9 79.72
Os01t0533000-00 Rice cytosol, plasma membrane 21.58 76.82
CDY06644 Canola cytosol 60.23 72.2
HORVU3Hr1G042540.3 Barley cytosol, mitochondrion 17.67 71.65
CDX72782 Canola cytosol 3.17 70.87
CDY10203 Canola plasma membrane 47.76 70.11
VIT_12s0028g00400.t01 Wine grape plasma membrane 51.37 68.34
CDY37215 Canola plasma membrane 20.58 67.43
KRG98933 Soybean cytosol, plastid 54.71 65.69
CDY06215 Canola cytosol 58.62 64.78
CDY09971 Canola cytosol 59.05 64.15
GSMUA_Achr1P05550_001 Banana endoplasmic reticulum, golgi, plasma membrane 35.48 63.43
CDY47436 Canola extracellular 1.87 63.24
TraesCS3A01G197600.2 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 17.72 62.58
KRH46028 Soybean cytosol 49.85 61.49
Os01t0533500-01 Rice plasma membrane 14.81 60.89
TraesCS3A01G202000.1 Wheat cytosol 50.07 60.02
KRG98945 Soybean cytosol 51.02 60.01
TraesCS3B01G229700.1 Wheat cytosol, plastid 50.02 59.97
TraesCS3D01G201500.1 Wheat cytosol 50.02 59.97
CDX71163 Canola cytosol, extracellular, plasma membrane 2.08 59.26
EES03079 Sorghum plasma membrane, plastid 49.67 59.15
Zm00001d044584_P006 Maize plastid 49.37 58.97
TraesCS2A01G586600.1 Wheat plastid 48.94 57.59
TraesCS2D01G600000.1 Wheat plastid 48.94 57.59
TraesCSU01G021500.1 Wheat plastid 48.81 57.49
CDY16627 Canola cytosol 14.85 56.81
CDY44742 Canola cytosol 14.85 56.81
HORVU2Hr1G118600.49 Barley mitochondrion 46.85 56.52
TraesCS6B01G001900.1 Wheat cytosol 41.81 55.86
CDY37214 Canola cytosol, mitochondrion, nucleus, plastid 2.43 54.9
HORVU3Hr1G058470.35 Barley mitochondrion 44.9 54.85
EES03083 Sorghum cytosol 43.51 54.49
TraesCS5D01G111000.2 Wheat mitochondrion 44.81 54.46
TraesCS3B01G230100.1 Wheat mitochondrion 44.85 54.45
CDY47273 Canola plasma membrane 39.73 54.14
HORVU3Hr1G042600.9 Barley cytosol, plastid 32.44 53.97
Zm00001d044566_P006 Maize cytosol 44.2 53.52
CDY42084 Canola cytosol, nucleus, plasma membrane 44.51 53.39
CDX97217 Canola cytosol 45.33 53.37
CDY10125 Canola mitochondrion 44.98 53.35
CDX69678 Canola cytosol 45.29 53.32
CDX85677 Canola cytosol, mitochondrion, nucleus, plasma membrane 45.12 53.2
CDX91152 Canola cytosol, mitochondrion, nucleus, plasma membrane 45.12 53.17
CDY67747 Canola mitochondrion 14.76 52.8
CDY12242 Canola mitochondrion 44.29 52.69
Os01t0533100-00 Rice mitochondrion, plastid 10.59 52.59
TraesCS6B01G002100.1 Wheat cytosol 38.99 51.43
CDX81451 Canola cytosol, plastid 42.99 51.24
CDY05323 Canola golgi, plasma membrane 25.58 49.0
CDY12248 Canola cytosol 3.08 47.65
CDX98473 Canola cytosol 39.77 46.95
CDY67378 Canola cytosol 8.9 43.8
TraesCS3A01G197500.1 Wheat mitochondrion 8.29 43.31
CDY08011 Canola cytosol 35.48 42.98
CDY42080 Canola cytosol 8.64 42.43
CDY48567 Canola plasma membrane 32.83 42.4
CDY24642 Canola cytosol 35.13 42.38
CDY33198 Canola cytosol, mitochondrion 34.78 42.34
CDX75010 Canola cytosol, mitochondrion 35.0 42.22
CDY21974 Canola plasma membrane 32.65 42.18
CDX74058 Canola mitochondrion 35.48 41.81
CDY34913 Canola cytosol 32.87 40.03
CDY01570 Canola cytosol 3.3 38.38
CDY72646 Canola cytosol 3.3 38.38
CDX86961 Canola cytosol 3.3 38.38
CDY38027 Canola cytosol 3.3 38.38
CDY67195 Canola cytosol 3.95 33.96
CDY44741 Canola cytosol, nucleus, plasma membrane 15.85 33.03
CDY16628 Canola cytosol, nucleus, plasma membrane 15.76 32.85
CDY67918 Canola cytosol, nucleus, plasma membrane 13.07 31.72
CDY42081 Canola cytosol 3.69 31.48
Zm00001d030559_P001 Maize mitochondrion 9.99 31.0
CDY47126 Canola plasma membrane 2.52 30.69
Zm00001d028611_P001 Maize plastid 3.86 30.07
CDY12867 Canola cytosol 4.04 29.71
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1GO:A0A078EG54EnsemblPlants:CDX98348ProteinID:CDX98348
ProteinID:CDX98348.1InterPro:DUF1084InterPro:FKS1-like_dom1GO:GO:0000148GO:GO:0003674GO:GO:0003824
GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006075
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00105901001InterPro:Glyco_trans_48InterPro:IPR023175PFAM:PF02364PFAM:PF04652PFAM:PF06454
PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF16MetaCyc:PWY-6773SMART:SM01205TMHMM:TMhelix
UniParc:UPI0004EE58DCInterPro:VPS_Vta1/CALS_NSEG:seg:::
Description
BnaC06g17090D
Coordinates
chrLK031904:+:714261..728129
Molecular Weight (calculated)
266786.0 Da
IEP (calculated)
8.909
GRAVY (calculated)
-0.100
Length
2303 amino acids
Sequence
(BLAST)
0001: MTITRTLFES KTDKCYAPSF VAVNLCLALI DGALALIAFL QLSRFHRRDK RVGWTRQKVL HLMIGSSNTG SLVYFVAAVI ATCTRWHHWS NPFGFLLMAF
0101: PKILFLATFL LLLSFWVDVC HQGNGEEEDD DDEESSIQQV FLEKSKSKPG SSSASDRRKC CSFHGIHVGT RQKFVVAAVV LVFILMISFA ILIWIASGDN
0201: SADPSLLAEV YVDIFASILL ITGGGLCFYG MRLLFNLRKV RSEQVSSEMR KVSGLAGVSV VCFSVSSLIA LLTHIPLFYH WNPNKLHGIN ALVLLIIYYF
0301: IGSTLPLAFV LWVLRELPPQ NIVSRQEEQT RITYVNYDTV PRQPPQQWTS TTVSKNQVSE FELFGEERVT DCSYSRLAME ASSSGTAELP RSLSRRAAPS
0401: RATTMMIDRP NEDASAMDSE LVPSSLASIA PILRVANEIE KDNPRVAYLC RFHAFEKAHR MDDTSSGRGV RQFKTYLLHR LEKEEEETKP QLAKSDPREI
0501: QAYYQNFYEK YIKEGETSRK PEEMARLYQI ASVLYDVLKT VVPSPKVDYE TRRYAEEVER KRDRYEHYNI LPLYAVGTKP AIVELPEVKA AFSAVRNVRN
0601: LPKRRVHLPS NAPDEMRKAR SRRFNDILEW LASEFGFQRG SVANQREHII LLLANADIRN RTDEEYDGLK SSTVTELMDK TFKNYYSWCK YLHREPNLKF
0701: PPDCDEQQLQ LIYISLYLLI WGEASNVRFM PECICYIFHH MANDVYGILF SNVEAVSGEA YETGEIIDEE TFLRNVITPI YQVIRDEARR NKGGTASHSQ
0801: WRNYDDLNEY FWSRKCFKIG WPLDPNADFF QNSDESTPQN ERLNQVTYGK RKPKTNFVEV RTFWNLFRDF DRMWIFFVMA FQAMVIVGWN GSGSLGEIFD
0901: KDIFKKVLTI FITSAYLTLL QAALDIILTF NAWKNFKLSQ ILRYLLKLAV AAMWAVLLPI AYSKSVQRPS GVVKFFSTWT GDWKDKSFYN YAVSFYVLPN
1001: ILSAFLFLIP PFRRVMECSD MRIIKLIMWW SQASLKFILG MHEDMLSLFK YTSFWIMLLI SKLSFNYYVE ILPLIKPTKM IMNLHIRNYQ WHEFFPHANN
1101: NVGVVIAVWA PIVLLTYIYI YIYIYIYYNI YIYIYIHTVW RHTWGLQSFG RNTDSWDSIP IAFSRTLMPT EDANRKHADD YGDQKKITNF SQVWNEFIIS
1201: MRREDKISDR DRDLLLVPSS SGDVSVIQWP PFLLASKIPI AVKMAKDFKG KEDAELFRKV TSDNYMHYAV TESYETLKKI ISALLEDNAD RRVMNQVFSE
1301: VDMSIQKQRF IYDFRMSGLT LLSDKLEKFL SILLSDYEDE GTYKSQLINV FQDVIEIITQ DLLVNGHEIV EKARIHSPDI KNEKKEQRFE KINIHLIQDK
1401: RWREKVVRLH LLLSVKESAI NVPQNLEARR RITFFANSLF MNMPNAPRIR DMLSFSVLTP YYKEDVLYSE EELNKENEDG ISILFYLQKI YPDEWTNFLD
1501: RLNDPKLLEK DKSEFLREWV SYRGQTLART VRGMMYYRQA LELQCYQEVA GENAKFSLHQ AMASNDEHQK AFLERAKALA DLKFTYVVSC QVYGNQKKSG
1601: DIHNRSCYTN ILQLMLKYPS LRVAYVDERE ETADAKSPKV FYSVLLKGGA KFDEEIYRIK LPGPPAEIGE GKPENQNHAI IFTRGEALQT IDMNQDNYFE
1701: EAFKLRNVLE EFKKERVGRR KPTILGLREH IFTGSVSSLA WFMSNQESSF VTIGQRILAN PLRVRFHYGH PDIFDRIFHI TRGGVSKASK VINLSEDIFG
1801: GFNSTLRGGY VTHHEYIQVG KGRDVGLNPI SIFEAKVANG NGEQTLSRDV YRLGHRFDFY RMLSFYFTTI GFYFSSVLTV ITVYAFLYGR MYMVMSGAEK
1901: EILRLATPNQ LAALEQALAT QSIFQLGFLM VLPMVMEIGL EEGFRSAIVD FFIMQLQLAS VFFTFQLGTK SHYYGRTILH GGSKYRPTGR GFVVFHAKFA
2001: ENYRLYSRSH FVKGLELLLL LIVYQVYGHS YRSSNLYLYI TVSMWFMVGS WLFAPFIFNP SGFEWQKTVD DWTDWKRWLD DRGGIGIPVD KSWESWWSVE
2101: QEYLKHTNIR GRILEITLAL RFFIYQYGIV YQLNISQNSK SFLVYGLSWV VLLTSLLVLK MVSMGRRKFG TDFQLMFRIL KALLFLGFLS VMTVLFVVCE
2201: LTLTDLSASI LAFLPTGWAI LLIGQVLRSP IKALGIWDSV KELGRAYEKI MGLVIFAPIA VLSWFPIVSE FQARLLFNQA FSRGLQISMI LAGRKDKAAS
2301: SYK
Best Arabidopsis Sequence Match ( AT3G59100.1 )
(BLAST)
0001: MEASSSGTAE LPRSLSRRAP SRATTMMIDR PNEDASAMDS ELVPSSLASI APILRVANEI EKDNPRVAYL CRFHAFEKAH RMDATSSGRG VRQFKTYLLH
0101: RLEKEEEETK PQLAKNDPRE IQAYYQNFYE KYIKEGETSR KPEEMARLYQ IASVLYDVLK TVVPSPKVDY ETRRYAEEVE RKRDRYEHYN ILPLYAVGTK
0201: PAIVELPEVK AAFSAVRNVR NLPRRRIHLP SNTPNEMRKA RTKLNDILEW LASEFGFQRG NVANQREHII LLLANADIRK RNDEEYDELK PSTVTELMDK
0301: TFKSYYSWCK YLHSTSNLKF PDDCDKQQLQ LIYISLYLLI WGEASNVRFM PECICYIFHN MANDVYGILF SNVEAVSGET YETEEVIDEE SFLRTVITPI
0401: YQVIRNEAKR NKGGTASHSQ WRNYDDLNEY FWSKKCFKIG WPLDLKADFF LNSDEITPQD ERLNQVTYGK SKPKTNFVEV RTFWNLFRDF DRMWIFLVMA
0501: FQAMVIVGWH GSGSLGDIFD KDVFKTVLTI FITSAYLTLL QAALDIILNF NAWKNFKFSQ ILRYLLKFAV AFMWAVLLPI AYSKSVQRPT GVVKFFSTWT
0601: GDWKDQSFYT YAVSFYVLPN ILAALLFLVP PFRRAMECSD MRPIKVIMWW AQPKLYVGRG MHEDMFSLFK YTTFWIMLLI SKLAFNYYVE ILPLITPTKM
0701: IMNLHIGHYQ WHEFFPHATN NIGVVIAIWA PIVLVYLMDT QIWYAIFSTL FGGIHGAFSH LGEIRTLGML RSRFESIPIA FSRTLMPSED AKRKHADDYV
0801: DQKNITNFSQ VWNEFIYSMR SEDKISDRDR DLLLVPSSSG DVSVIQWPPF LLASKIPIAV DMAKDFKGKE DAELFRKIKS DSYMYYAVIE SYETLKKIIY
0901: ALLEDEADRR VMNQVFLEVD MSMQQQRFIY EFRMSGLPLL SDKLEKFLSI LLSDYEDQGT YKSQLINVFQ DVIEIITQDL LVNGHEILER ARVHSPDIKN
1001: EKKEQRFEKI NIHLVRDRCW REKVIRLHLL LSVKESAINV PQNLEARRRI TFFANSLFMN MPSAPRIRDM LSFSVLTPYY KEDVLYSEED LNKENEDGIS
1101: ILFYLQKIYP DEWTNYLDRL KDPKLPEKDK SEFLREWVSY RGQTLARTVR GMMYYRQALE LQCYQEVAGE QAEFSVFRAM ASNDENQKAF LERARALADL
1201: KFTYVVSCQV YGNQKKSGDI HNRSCYTNIL QLMLKYPSLR VAYVDEREET ADAKSPKVFY SVLLKGGDKF DEEIYRIKLP GPPAEIGEGK PENQNHAIIF
1301: TRGEALQTID MNQDNYFEEA FKLRNVLEEF NKERVGRRKP TILGLREHIF TGSVSSLAWF MSNQESSFVT IGQRILANPL RVRFHYGHPD IFDRIFHITR
1401: GGVSKASKVI NLSEDIFGGF NSTLRGGYVT HHEYIQVGKG RDVGLNPISI FEAKVANGNG EQTLSRDVYR LGHRFDFYRM LSFYFTTIGF YFSSMLTVLT
1501: VYAFLYGRMY MVMSGLEKEI LRLASPNQLE ALEQALATQS IFQLGFLMVL PMVMEIGLEH GFRSAIVDFF IMQLQLASVF FTFQLGTKSH YYGRTILHGG
1601: SKYRPTGRGF VVFHAKFAEN YRLYSRSHFV KGLELLLLLV VYQIYGHSYR SSNLYLYITV SMWFMVGSWL FAPFIFNPSG FEWQKTVDDW TDWKRWLGDR
1701: GGIGIPVEKS WESWWNVEQE HLKHTSIRGR ILEITLALRF FIYQYGIVYQ LNISQRSKSF LVYGLSWVVL LTSLLVLKMV SMGRRRFGTD FQLMFRILKA
1801: LLFLGFLSVM TILFVVFKLT LTDLSASVLA FLPTGWAILL IGQVLRSPIK ALGVWDSVKE LGRAYENIMG LVIFAPIAVL SWFPIVSEFQ ARLLFNQAFS
1901: RGLQISMILA GRKDKATSSH K
Arabidopsis Description
CALS6Putative callose synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.