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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • cytosol 2
  • plastid 4
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0533000-00 Rice cytosol, plasma membrane 31.23 93.35
Zm00001d044584_P006 Maize plastid 91.36 91.65
HORVU3Hr1G042540.3 Barley cytosol, mitochondrion 25.8 87.85
TraesCS3D01G201500.1 Wheat cytosol 83.25 83.81
TraesCS3A01G202000.1 Wheat cytosol 83.14 83.71
TraesCS3B01G229700.1 Wheat cytosol, plastid 83.04 83.6
HORVU3Hr1G042600.9 Barley cytosol, plastid 57.96 81.0
TraesCSU01G021500.1 Wheat plastid 80.66 79.8
TraesCS2A01G586600.1 Wheat plastid 80.56 79.61
TraesCS2D01G600000.1 Wheat plastid 80.35 79.41
HORVU2Hr1G118600.49 Barley mitochondrion 76.73 77.74
Os01t0533100-00 Rice mitochondrion, plastid 18.36 76.51
TraesCS6B01G001900.1 Wheat cytosol 67.53 75.75
CDY10204 Canola plasma membrane 10.39 70.28
GSMUA_Achr1P05550_001 Banana endoplasmic reticulum, golgi, plasma membrane 45.4 68.17
VIT_12s0028g00400.t01 Wine grape plasma membrane 58.84 65.74
Solyc07g056260.2.1 Tomato cytosol, plastid 62.77 63.53
CDY06644 Canola cytosol 62.31 62.73
Bra015504.1-P Field mustard cytosol 62.2 62.62
AT3G59100.1 Thale cress cytosol 61.58 62.0
EES03083 Sorghum cytosol 58.69 61.72
AT1G06490.1 Thale cress cytosol 62.36 61.59
CDY10203 Canola plasma membrane 49.07 60.48
CDX67777 Canola cytosol 60.39 60.3
OQU93478 Sorghum plasma membrane 9.1 58.86
Bra032416.1-P Field mustard cytosol 61.48 57.66
CDY06215 Canola cytosol 61.58 57.15
CDY09971 Canola cytosol 62.0 56.56
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 55.33 54.82
OQU75971 Sorghum cytosol 53.26 54.07
EER90434 Sorghum plastid 54.86 53.99
OQU93328 Sorghum mitochondrion 53.52 52.97
Bra003364.1-P Field mustard cytosol, golgi, plasma membrane 60.13 51.41
CDX98348 Canola cytosol, golgi, plasma membrane 59.15 49.67
KXG29910 Sorghum cytosol 49.12 47.69
KXG40330 Sorghum cytosol 43.54 44.08
KXG33388 Sorghum mitochondrion 40.69 43.97
KXG33086 Sorghum cytosol 40.43 43.96
KRH25579 Soybean golgi, mitochondrion, plasma membrane 7.65 43.15
KXG40423 Sorghum mitochondrion 29.06 39.61
KRH25578 Soybean mitochondrion 9.46 37.89
CDY47126 Canola plasma membrane 3.21 32.8
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1UniProt:C5XM95EnsemblPlants:EES03079ProteinID:EES03079
ProteinID:EES03079.2InterPro:FKS1-like_dom1GO:GO:0000148GO:GO:0003674GO:GO:0003824GO:GO:0003843
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006075GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740
InterPro:Glyco_trans_48InterPro:IPR023175PFAM:PF02364PFAM:PF04652PFAM:PF14288PANTHER:PTHR12741
PANTHER:PTHR12741:SF16MetaCyc:PWY-6773SMART:SM01205EnsemblPlantsGene:SORBI_3003G179600TMHMM:TMhelixUniParc:UPI00081AB87C
InterPro:VPS_Vta1/CALS_NSEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:46826841..46853097
Molecular Weight (calculated)
224149.0 Da
IEP (calculated)
8.626
GRAVY (calculated)
-0.149
Length
1934 amino acids
Sequence
(BLAST)
0001: MASGGAGPSG PVRSTSQTRQ RTMGRIPTRA YTMRPDGLSG EDGPGFEEEE LVPSSLAPIV PILRAANEIE EENPRVAYLC RFTAFEKAHL MDPISGGRGV
0101: RQFKTYLLHR LEKDEHETNR RLATTDAKEI QRFYEQYCKK YLEEGHDKRK PEEMARHYQI ASVLYDVLKT VTPGKNEYDK YAKGVEKEKA SFSQYNILPL
0201: NISTPRQPIM EIPEIKAAVA LLRQMDDLPM PRIELTQSSD GKTVPDEMDK PLVQDLLDWL WQTFGFQKGN VENQKEHLIL LLANIDMRQQ GTSHHSGRHV
0301: HVIHSSTVIY LMDKIFQNYN SWCRYLHLDS NIIIASDAST QRPELLYIGL YLLIWGEASN VRFMPECLCY IFHHMARDLH DIISDRREGP FEPPFQREGS
0401: DDAFLQLVIQ PIYSVMQKEA ARGKHGTVSH SMWRNYDDLN EYFWSKKCFK KLGWPMNPTA DFFADTRATN ETEQHDHVIS RRRQHDHVIS RRRASKTNFV
0501: EVRTFLHLFR SFDRMWAFFI LAFQAMVIIA WSSSGALSSI FEPEVFRNVL TIFITAAFLN FLQATLEIIL NWKAWKSLEC SQRIRYILKF AVAVAWLIIL
0601: PTTYSSSIQN PTGLVKFVSN WINLQNESIY NYAVALYMLP NIFSALFFMF LPIRRVLERS NSRIIRFLLW WTQPKLYVAR GMYEDTCSLL KYTTFWILLL
0701: ICKLAFSYYV EIAPLVEPTR IIMSLERPPY EWHEFFPNLR HNLGVVVTVW APIVMVYFMD TQIWYAIFST ICGGVYGAFS RLGEIRTLGM LRSRFEAIPR
0801: AFGKKLVPNH GSRLKRDEED KNPPFDKFAD IWNAFINSLR EEDLLSNREK NLLVVPSSGG ETSVFQWPPF LLASKIPIAL DMAKSVKKKD EELMKRIKQD
0901: PYTEYAVIEC YETLLDILYS IIVEQSDKKV VDRICESIKD SIHRRSLVKE FRLDELPQLS VKFDKLLDLL KKYDENDPVN NNTQIANLLQ DIMEIITQDI
1001: MKNGQGILKD EGQKQLFANL NLDSLKDVAW KEKCIRLQLL LTTKESAIYV PTNLEARRRI TFFANSLFMK MPRAPPVRSM MSFSVLTPYF KEEVLFSPED
1101: LRKKNEDGIS ILFYLRKIYP DEFRNFLERI DFKPKDEEEL KDRMDEICPW ASYRGQTLTR TVRGMMYYRK ALEIQCLQDT KDPAKFDQDG LIESYRELQS
1201: SIEMAQAIAD IKFTYVVSCQ VYGMQKTSKD SKDKSRYQNI LNLMIINPSL RVAFIDEVEA PTGNGATEKT YYSVLVKGGE KYDEEIYRIK LPGKPTDIGE
1301: GKPENQNHAI IFTRGEALQA IDMNQDNYIE EAFKMRNVLE EFESRKYGKS EPTILGLREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAN PLKVRFHYGH
1401: PDIFDRLFHI TRGGISKASK TINLSEDIFS GFNSTMRGGN VTHHEYMQVG KGRDVGMNQI SSFEAKVANG NGEQTLSRDI YRLGRRFDFY RMLSFYFTTV
1501: GFYFSSMVTV LTVYVFLYGR LYLVMSGLER SIMLDARNQQ NVKALENALA SQSIFQLGLL LVLPMVMEVG LEKGFRTALG EFVIMQLQLA SVFFTFQLGT
1601: KTHYYGRTIL HGGAKYRPTG RGFVVYHAKF AENYRMYSRS HFVKGLELLI LLVVYLVYGR SYRSSSLYLF VTCSMWFLVA SWLFAPFIFN PSCFEWQKTV
1701: DDWTDWRKWM GNRGGIGMSV EQSWEAWWLS EQDHLRKTSI RALLLEIILS LRFLIYQYGI VYHLNIADHH KSIMVYGVSW VVMLLVLVVL KMVSIGRQKF
1801: GTDLQLMFRI LKGLLFLGFV SVMAVLFVVL HLTISDVFAS ILGYLPTGWC LLLIGQACSP LIRRTMLWDS IMELGRSYEN IMGLILFLPI GFLSWFPFVS
1901: EFQTRLLFNQ AFSRGLQISR ILAGQKGIGE FEFE
Best Arabidopsis Sequence Match ( AT1G06490.2 )
(BLAST)
0001: MASTSSGGRG EDGRPPQMQP VRSMSRKMTR AGTMMIEHPN EDERPIDSEL VPSSLASIAP ILRVANDIDQ DNARVAYLCR FHAFEKAHRM DPTSSGRGVR
0101: QFKTYLLHKL EEEEEITEHM LAKSDPREIQ LYYQTFYENN IQDGEGKKTP EEMAKLYQIA TVLYDVLKTV VPQARIDDKT LRYAKEVERK KEQYEHYNIL
0201: PLYALGAKTA VMELPEIKAA ILAVCNVDNL PRPRFHSASA NLDEVDRERG RSFNDILEWL ALVFGFQRGN VANQREHLIL LLANIDVRKR DLENYVEIKP
0301: STVRKLMEKY FKNYNSWCKY LRCDSYLRFP AGCDKQQLSL LYIGLYLLIW GEASNVRFMP ECLCYIFHNM ANEVHGILFG NVYPVTGDTY EAGAPDEEAF
0401: LRNVITPIYQ VLRKEVRRNK NGKASHSKWR NYDDLNEYFW DKRCFRLKWP MNFKADFFIH TDEISQVPNQ RHDQVSHGKR KPKTNFVEAR TFWNLYRSFD
0501: RMWMFLVLSL QTMIIVAWHP SGSILAIFTE DVFRNVLTIF ITSAFLNLLQ ATLDLVLSFG AWKSLKFSQI MRYITKFLMA AMWAIMLPIT YSKSVQNPTG
0601: LIKFFSSWVG SWLHRSLYDY AIALYVLPNI LAAVFFLLPP LRRIMERSNM RIVTLIMWWA QPKLYIGRGM HEEMFALFKY TFFWVMLLLS KLAFSYYVEI
0701: LPLVNPTKLI WDMHVVNYEW HEFFPNATHN IGVIIAIWGP IVLVYFMDTQ IWYAIFSTLF GGIYGAFSHL GEIRTLGMLR SRFKVVPSAF CSKLTPLPLG
0801: HAKRKHLDET VDEKDIARFS QMWNKFIHTM RDEDLISDRE RDLLLVPSSS GDVTVVQWPP FLLASKIPIA LDMAKDFKGK EDVDLFKKIK SEYYMHYAVV
0901: EAYETVRDII YGLLQDESDK RIVREICYEV DISIQQHRFL SEFRMTGMPL LSDKLEKFLK ILLSDYEEDD YKSQIINVLQ DIIEIITQDV MVNGHEILER
1001: AHLQSGDIES DKKEQRFEKI DLSLTQNISW REKVVRLLLL LTVKESAINI PQSLEARRRM TFFANSLFMN MPDAPRVRDM LSFSVLTPYY KEDVLYSEEE
1101: LNKENEDGIT ILFYLQRIYP EEWSNYCERV NDLKRNLSEK DKAEQLRQWV SYRGQTLSRT VRGMMYYRVA LELQCFQEYT EENATNGGYL PSESNEDDRK
1201: AFSDRARALA DLKFTYVVSC QVYGNQKKSS ESRDRSCYNN ILQLMLKYPS LRVAYIDERE ETVNGKSQKV FYSVLLKGCD KLDEEIYRIK LPGPPTEIGE
1301: GKPENQNHAI IFTRGEALQT IDMNQDNYFE ECFKMRNVLQ EFDEGRRGKR NPTILGLREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAN PLRVRFHYGH
1401: PDIFDRIFHI TRGGISKASK IINLSEDIFA GYNSTLRGGY VTHHEYIQAG KGRDVGMNQI SFFEAKVANG NGEQTLSRDV YRLGRRFDFY RMLSFYFTTV
1501: GFYFSSMITV LTVYVFLYGR LYLVLSGLEK NILQSASVHE SNALEQALAA QSVFQLGFLM VLPMVMEIGL EKGFRTALGD FIIMQLQLAS VFFTFQLGTK
1601: AHYFGRTILH GGSKYRATGR GFVVFHAKFA ENYRLYSRSH FVKGLELVIL LVVYQVYGTS YRSSSTYMYI TFSMWFLVTS WLFAPFIFNP SGFEWQKTVD
1701: DWTDWKRWMG NRGGIGIVLD KSWESWWDIE QEHLKHTNLR GRVLEILLAL RFLLYQYGIV YHLNIARRHT TFLVYGLSWA ILLSVLLVLK MVSMGRRKFG
1801: TDFQVMFRIL KALLFLGFLS VMTVLFVVCG LTISDLFASI LAFLPTGWAI LLIGQALRSV FKGLGFWDSV KELGRAYEYI MGLVIFTPIA VLSWFPFVSE
1901: FQTRLLFNQA FSRGLQISMI LAGKKDKETP STK
Arabidopsis Description
CALS7Callose synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.