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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • plasma membrane 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027475_P001 Maize mitochondrion, plastid 15.51 98.06
Zm00001d027472_P002 Maize mitochondrion 97.24 97.64
Os03t0128100-01 Rice cytosol, plasma membrane 29.79 92.97
Os03t0128200-01 Rice mitochondrion 25.08 90.91
TraesCS4B01G321300.2 Wheat mitochondrion 85.77 86.13
TraesCS5A01G490800.2 Wheat mitochondrion 85.67 86.02
HORVU4Hr1G082910.11 Barley mitochondrion 85.62 85.84
TraesCS4D01G317900.5 Wheat mitochondrion 85.72 85.77
GSMUA_Achr8P13480_001 Banana cytosol 28.61 83.68
PGSC0003DMT400074555 Potato plasma membrane 17.91 76.25
GSMUA_Achr8P13500_001 Banana mitochondrion 18.32 75.53
KRH46871 Soybean mitochondrion 74.0 73.85
KRH01816 Soybean cytosol 73.95 73.8
VIT_06s0004g01270.t01 Wine grape cytosol, mitochondrion, nucleus, plasma membrane 74.05 73.68
PGSC0003DMT400082011 Potato mitochondrion 73.39 73.61
Solyc01g006370.2.1 Tomato nucleus 73.29 73.51
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 73.03 73.1
AT5G13000.1 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 73.13 73.09
Solyc01g073750.2.1 Tomato nucleus 67.2 73.03
Bra023386.1-P Field mustard cytosol, mitochondrion, nucleus, plasma membrane 72.83 72.86
CDX85677 Canola cytosol, mitochondrion, nucleus, plasma membrane 72.83 72.86
EER90434 Sorghum plastid 73.18 72.77
CDX69678 Canola cytosol 72.83 72.75
CDX97217 Canola cytosol 72.77 72.7
CDX91152 Canola cytosol, mitochondrion, nucleus, plasma membrane 72.67 72.67
VIT_13s0156g00210.t01 Wine grape mitochondrion 72.11 72.4
Bra008864.1-P Field mustard cytosol, plastid 70.83 71.71
CDY42084 Canola cytosol, nucleus, plasma membrane 69.86 71.09
AT2G31960.3 Thale cress cytosol 70.88 71.03
AT1G05570.1 Thale cress cytosol, mitochondrion, plasma membrane 70.78 70.92
CDY12242 Canola mitochondrion 69.75 70.4
Bra015436.1-P Field mustard mitochondrion 69.75 70.33
KRH13867 Soybean mitochondrion 70.01 70.23
KRH43561 Soybean mitochondrion 69.96 70.21
Bra005624.1-P Field mustard cytosol, nucleus, plasma membrane 70.06 70.03
CDY10125 Canola mitochondrion 69.4 69.82
CDY47273 Canola plasma membrane 59.77 69.11
CDY67378 Canola cytosol 15.35 64.1
Bra005620.1-P Field mustard cytosol 15.1 62.9
CDY42080 Canola cytosol 15.05 62.69
CDY12248 Canola cytosol 4.76 62.42
OQU75971 Sorghum cytosol 60.59 62.15
AT5G36870.1 Thale cress cytosol, mitochondrion, plasma membrane 57.78 60.34
GSMUA_Achr8P13490_001 Banana plasma membrane 27.84 60.24
KRG93040 Soybean plasma membrane 24.97 60.02
CDX72782 Canola cytosol 3.12 59.22
OQU93478 Sorghum plasma membrane 8.6 56.19
EES03079 Sorghum plasma membrane, plastid 52.97 53.52
EES03083 Sorghum cytosol 48.87 51.93
KXG29910 Sorghum cytosol 50.92 49.95
KXG33086 Sorghum cytosol 41.97 46.09
KXG33388 Sorghum mitochondrion 41.56 45.36
KXG40330 Sorghum cytosol 43.71 44.71
KXG40423 Sorghum mitochondrion 29.99 41.3
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1UniProt:A0A1Z5SBN5InterPro:CALSncoils:Coil
InterPro:FKS1-like_dom1GO:GO:0000148GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_48
InterPro:IPR023175EnsemblPlants:OQU93328ProteinID:OQU93328ProteinID:OQU93328.1PFAM:PF02364PFAM:PF04652
PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF21SMART:SM01205EnsemblPlantsGene:SORBI_3001G521500TMHMM:TMhelix
UniParc:UPI000B8B9821InterPro:VPS_Vta1/CALS_NSEG:seg:::
Description
hypothetical protein
Coordinates
chr1:+:78651133..78669729
Molecular Weight (calculated)
226344.0 Da
IEP (calculated)
9.013
GRAVY (calculated)
-0.100
Length
1954 amino acids
Sequence
(BLAST)
0001: MTSLSRTLSR GGPMQPPGSR RIQRTQTAVN FGEPMFDSEV VPSSLVEIAP ILRVANEVET ANPRVAYLCR FYAFEKAHRL DPTSSGRGVR QFKTALLQRL
0101: ERENEPTLMG RGQKSDAREI QTFYHHYYKK YIQALQNASD QVDRAQLTKA YQTAAVLFEV LKAVTQQHAV EVDHEILEAA DKVKEKTKIY LPFNILPLDP
0201: DSGNQAIMKF PEIQAAASAL RNTRGLPWPK TYEHKVNEDL LDWLQAMFGF QERQFTFLLT DSVSNQREHL ILLLANIHIR RNPKTDQQSK LDDNALNDVM
0301: KRLFKNYKKW CKYLGRKSSL WLPTIQQEMQ QRKILYMGLY LLIWGEAANL RFMPECICYI YHHMAFEMYG MLAGNVSALT GEYVKPAYGG EKEAFLKKVV
0401: TPIYHTIAKE AERSKREKGN HSEWRNYDDL NEYFWSADCF RLGWPMRADA DFFCQPDERN ESTRISKQKG KINFVELRSF WHIFRSFDRL WSFFILALQV
0501: MIILAWEGGS LASIFDYAVF KKVLSIFITS AILNLGQATL DIIFNWKARR TMEFAVKLRY VLKFVMAALW VVLLPVTYAY TWENPTGIIR VIKSWFGNGR
0601: NHPPLFVVSV VIYLSPSMLS AILFLLPFLR RSLESSDFKL VRFIMWWSQP RLFVGRGMHE SAFSLFMYTM FWIALLLIKF AFSYYVEIKP LVEPTKVIMK
0701: TPIRTFRWHE FFPREKSNIG VVIALWAPII LVYFMDTQIW YTIFSTLLGG IYGAFQRLGE IRTLGMLRSR FDSIPLAFNS CLIPVETSDA KRKKGLRSYL
0801: HNRFKEMEHA DKENIAARFA QMWNEIVTSF RDEDLIDNRE KELLLVPYVS DQALGVVQWP PFLLASKIPI AVDMAKDSNG KDRDLKKRLE NDYYFKCAIE
0901: ECYASFKNII NDLVQGEPEK RVIKKIFEEV EKCISEDKVI ADLNMRALPD LYSKFVELVT YLKENDEKDR SAVIKIFQDM LEVVTRDIFD DQLSILESSH
1001: GGSYQKHDDT TAWDKEYQLF QPSGAIKFPL QVTTTDAWLE KIKRLELLLT VKESAMDVPS NLEARRRLTF FTNSLFMDMP DAPKVRNMLS FSALTPYYNE
1101: PVLFSIKELE EENEDGVSTL FYLQKIYPDE WKNFKERVGL EEELKESEES EELKEELRLW ASYRGQTLAR TVRGMMYYKK ALNLEAFLDM AKREDLMEGY
1201: KAAESVNDEQ WKIQQRSLFA QCEAVADMKF TYVVSCQQYG NDKRAALANA QDILQLMRNY SSLRVAYIDE VEDRVGDKKM ETAYYSTLVK VALTKDSESA
1301: DPIQNLDQVI YRIKLPGPAI LGEGKPENQN HAIIFTRGEG LQTIDMNQDN YLEEALKMRN LLQEFLTEHG VRRPSILGVR EHIFTGSVSS LAWFMSNQEH
1401: SFVTIGQRLL ANPLKVRFHY GHPDVFDRLF HLTRGGVSKA SKSINLSEDI FAGYNSTLRG GNVTHHEYVQ VGKGRDVGLN QISKFEAKVA NGNGEQTLSR
1501: DIYRLGHRFD FFRMLSCYFT TVGFYFSTLL TVVTVYVFLY GRLYLALSGL EEGLSQGRLI HNHPLQVALA SQSLVQLGFL MALPMMMEIG LERGFGQALS
1601: DLIMMNLQLA TVFFTFSLGT KTHYYGRMLL HGGAQYRGTG RGFVVFHAKF AENYRLYSRS HFVKGIELMI LLIVYQLFGQ SYRSTIAYIF ITISMWFLVL
1701: TWLFAPFLFN PSGFEWAKIV DDWSDWNKWI SNRGGIGVSP DKSWESWWEV EQDHLKYSGT IGRFVEIILA VRFFIYQYGL VYHLHITHDK SILVYLMSWL
1801: VIVAVLFVMK TVSVGRRTFS ADFQLFFRLI KFLIFVAFTA ILIVLIVFLH MTFRDIFVCF LAFLPTGWGI LLIAQACKPL ARHVGLWGSV RALARAYEII
1901: MGVLLFTPIT ILAWFPFVSE FQTRMLFNQA FSRGLQISRI LGGQKKERSA RSKD
Best Arabidopsis Sequence Match ( AT5G13000.1 )
(BLAST)
0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTV RGMMYYRKAL ELQAFLDMAM HEDLMEGYKA
1201: VELNSENNSR GERSLWAQCQ AVADMKFTYV VSCQQYGIHK RSGDPRAQDI LRLMTRYPSL RVAYIDEVEE PVKDKSKKGN QKVYYSVLVK VPKSTDHSTL
1301: AQNLDQVIYR IRLPGPAILG EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS
1401: FVTIGQRLLA NPLRVRFHYG HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD
1501: IYRLGHRFDF FRMMSCYFTT VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS
1601: EFVLMQLQLA PVFFTFSLGT KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG
1701: TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW
1801: LVIFLILFVM KTVSVGRRRF SASFQLMFRL IKGLIFMTFI AIIVILITLA HMTIQDIIVC ILAFMPTGWG MLLIAQACKP VVHRAGFWGS VRTLARGYEI
1901: VMGLLLFTPV AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHRKDRS SRNKE
Arabidopsis Description
CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.